RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 TMEM102Q8N9M5 508 aaPredicted RBP15.78■□□□□ 0.12
DDX56-210ENST00000479440 ADAMTS17Q8TE56 1095 aa15.78■□□□□ 0.12
DDX56-210ENST00000479440 TEKT4Q8WW24 435 aa15.78■□□□□ 0.12
DDX56-210ENST00000479440 GLYATL1Q969I3 302 aa15.78■□□□□ 0.12
DDX56-210ENST00000479440 ZNF653Q96CK0 615 aa15.78■□□□□ 0.12
DDX56-210ENST00000479440 TRIM11Q96F44 468 aa15.78■□□□□ 0.12
DDX56-210ENST00000479440 AKIRIN1Q9H9L7 192 aaPredicted RBP15.78■□□□□ 0.12
DDX56-210ENST00000479440 MRPL47Q9HD33 250 aaKnown RBP15.78■□□□□ 0.12
DDX56-210ENST00000479440 RAD18Q9NS91 495 aa15.78■□□□□ 0.12
DDX56-210ENST00000479440 SLC23A2Q9UGH3 650 aa15.78■□□□□ 0.12
DDX56-210ENST00000479440 TLCD2A6NGC4 264 aa15.77■□□□□ 0.12
DDX56-210ENST00000479440 ZNF185O15231 689 aa15.77■□□□□ 0.12
DDX56-210ENST00000479440 MATN3O15232 486 aa15.77■□□□□ 0.12
DDX56-210ENST00000479440 MFSD11O43934 449 aa15.77■□□□□ 0.12
DDX56-210ENST00000479440 FECHP22830 423 aa15.77■□□□□ 0.12
DDX56-210ENST00000479440 DRG2P55039 364 aaKnown RBP15.77■□□□□ 0.12
DDX56-210ENST00000479440 TUBB4BP68371 445 aa15.77■□□□□ 0.12
DDX56-210ENST00000479440 GALNT2Q10471 571 aa15.77■□□□□ 0.12
DDX56-210ENST00000479440 TUBB2AQ13885 445 aa15.77■□□□□ 0.12
DDX56-210ENST00000479440 KRT81Q14533 505 aa15.77■□□□□ 0.12
DDX56-210ENST00000479440 QPCTQ16769 361 aa15.77■□□□□ 0.12
DDX56-210ENST00000479440 DNTTIP2Q5QJE6 756 aaKnown RBP15.77■□□□□ 0.12
DDX56-210ENST00000479440 VWA5B1Q5TIE3 1220 aa15.77■□□□□ 0.12
DDX56-210ENST00000479440 GLIS1Q8NBF1 620 aa15.77■□□□□ 0.12
DDX56-210ENST00000479440 FATE1Q969F0 183 aa15.77■□□□□ 0.12
DDX56-210ENST00000479440 SNRNP40Q96DI7 357 aaKnown RBP15.77■□□□□ 0.12
DDX56-210ENST00000479440 LRFN5Q96NI6 719 aa15.77■□□□□ 0.12
DDX56-210ENST00000479440 SMAD5Q99717 465 aaKnown RBP15.77■□□□□ 0.12
DDX56-210ENST00000479440 TUBB2BQ9BVA1 445 aa15.77■□□□□ 0.12
DDX56-210ENST00000479440 NUP85Q9BW27 656 aa15.77■□□□□ 0.12
DDX56-210ENST00000479440 ADGRE3Q9BY15 652 aa15.77■□□□□ 0.12
DDX56-210ENST00000479440 NUP62CLQ9H1M0 184 aa15.77■□□□□ 0.12
DDX56-210ENST00000479440 FANCEQ9HB96 536 aa15.77■□□□□ 0.12
DDX56-210ENST00000479440 ZFYVE1Q9HBF4 777 aa15.77■□□□□ 0.12
DDX56-210ENST00000479440 PCDH18Q9HCL0 1135 aa15.77■□□□□ 0.12
DDX56-210ENST00000479440 LATS2Q9NRM7 1088 aa15.77■□□□□ 0.12
DDX56-210ENST00000479440 RBM22Q9NW64 420 aaKnown RBP eCLIP15.77■□□□□ 0.12
DDX56-210ENST00000479440 C5AR2Q9P296 337 aa15.77■□□□□ 0.12
DDX56-210ENST00000479440 NFKBIL1Q9UBC1 381 aaPredicted RBP15.77■□□□□ 0.12
DDX56-210ENST00000479440 UBA6A0AVT1 1052 aaPredicted RBP15.76■□□□□ 0.11
DDX56-210ENST00000479440 ANKUB1A6NFN9 424 aa15.76■□□□□ 0.11
DDX56-210ENST00000479440 KRT86O43790 486 aa15.76■□□□□ 0.11
DDX56-210ENST00000479440 CBX6O95503 412 aa15.76■□□□□ 0.11
DDX56-210ENST00000479440 RARAP10276 462 aa15.76■□□□□ 0.11
DDX56-210ENST00000479440 ITGA1P56199 1179 aa15.76■□□□□ 0.11
DDX56-210ENST00000479440 PPP1CAP62136 330 aa15.76■□□□□ 0.11
DDX56-210ENST00000479440 HSD11B2P80365 405 aa15.76■□□□□ 0.11
DDX56-210ENST00000479440 UBXN1Q04323 297 aa15.76■□□□□ 0.11
DDX56-210ENST00000479440 GPS2Q13227 327 aa15.76■□□□□ 0.11
DDX56-210ENST00000479440 GTF2H3Q13889 308 aa15.76■□□□□ 0.11
DDX56-210ENST00000479440 PLCL1Q15111 1095 aa15.76■□□□□ 0.11
DDX56-210ENST00000479440 CCDC122Q5T0U0 273 aa15.76■□□□□ 0.11
DDX56-210ENST00000479440 TMTC4Q5T4D3 741 aa15.76■□□□□ 0.11
DDX56-210ENST00000479440 ZNF517Q6ZMY9 492 aaPredicted RBP15.76■□□□□ 0.11
DDX56-210ENST00000479440 D2HGDHQ8N465 521 aa15.76■□□□□ 0.11
DDX56-210ENST00000479440 ENDOVQ8N8Q3 282 aaKnown RBP15.76■□□□□ 0.11
DDX56-210ENST00000479440 ARRDC2Q8TBH0 407 aa15.76■□□□□ 0.11
DDX56-210ENST00000479440 C19orf60Q96EN9 201 aa15.76■□□□□ 0.11
DDX56-210ENST00000479440 ERGIC2Q96RQ1 377 aa15.76■□□□□ 0.11
DDX56-210ENST00000479440 MAP3K3Q99759 626 aa15.76■□□□□ 0.11
DDX56-210ENST00000479440 SYT11Q9BT88 431 aa15.76■□□□□ 0.11
DDX56-210ENST00000479440 CHST8Q9H2A9 424 aa15.76■□□□□ 0.11
DDX56-210ENST00000479440 TMEM63CQ9P1W3 806 aa15.76■□□□□ 0.11
DDX56-210ENST00000479440 TCFL5Q9UL49 500 aa15.76■□□□□ 0.11
DDX56-210ENST00000479440 DOPEY1Q5JWR5 2465 aa15.76■□□□□ 0.11
DDX56-210ENST00000479440 TEP1Q99973 2627 aaKnown RBP15.76■□□□□ 0.11
DDX56-210ENST00000479440 CACNA1DQ01668 2161 aa15.75■□□□□ 0.11
DDX56-210ENST00000479440 A6NL46 340 aa15.75■□□□□ 0.11
DDX56-210ENST00000479440 ANKRD66B4E2M5 251 aa15.75■□□□□ 0.11
DDX56-210ENST00000479440 HNRNPRO43390 633 aaKnown RBP15.75■□□□□ 0.11
DDX56-210ENST00000479440 MTX2O75431 263 aa15.75■□□□□ 0.11
DDX56-210ENST00000479440 CDK14O94921 469 aa15.75■□□□□ 0.11
DDX56-210ENST00000479440 SLC4A1P02730 911 aa15.75■□□□□ 0.11
DDX56-210ENST00000479440 HLA-DQB2P05538 268 aa15.75■□□□□ 0.11
DDX56-210ENST00000479440 MYBL1P10243 752 aa15.75■□□□□ 0.11
DDX56-210ENST00000479440 IL4RP24394 825 aa15.75■□□□□ 0.11
DDX56-210ENST00000479440 IHHQ14623 411 aa15.75■□□□□ 0.11
DDX56-210ENST00000479440 IFI16Q16666 785 aaKnown RBP15.75■□□□□ 0.11
DDX56-210ENST00000479440 TRAPPC5Q8IUR0 188 aa15.75■□□□□ 0.11
DDX56-210ENST00000479440 CPT1BQ92523 772 aa15.75■□□□□ 0.11
DDX56-210ENST00000479440 SGSM3Q96HU1 749 aa15.75■□□□□ 0.11
DDX56-210ENST00000479440 NLNQ9BYT8 704 aa15.75■□□□□ 0.11
DDX56-210ENST00000479440 ILKAPQ9H0C8 392 aaPredicted RBP15.75■□□□□ 0.11
DDX56-210ENST00000479440 KCND1Q9NSA2 647 aa15.75■□□□□ 0.11
DDX56-210ENST00000479440 ASF1BQ9NVP2 202 aa15.75■□□□□ 0.11
DDX56-210ENST00000479440 TRIM10Q9UDY6 481 aa15.75■□□□□ 0.11
DDX56-210ENST00000479440 B3GNT3Q9Y2A9 372 aa15.75■□□□□ 0.11
DDX56-210ENST00000479440 KLHL41O60662 606 aa15.74■□□□□ 0.11
DDX56-210ENST00000479440 ZBTB11O95625 1053 aaPredicted RBP15.74■□□□□ 0.11
DDX56-210ENST00000479440 FTLP02792 175 aaPredicted RBP15.74■□□□□ 0.11
DDX56-210ENST00000479440 ALPPP05187 535 aa15.74■□□□□ 0.11
DDX56-210ENST00000479440 TCF4P15884 667 aa15.74■□□□□ 0.11
DDX56-210ENST00000479440 POU3F2P20265 443 aaPredicted RBP15.74■□□□□ 0.11
DDX56-210ENST00000479440 CCNCP24863 283 aa15.74■□□□□ 0.11
DDX56-210ENST00000479440 PER3P56645 1201 aa15.74■□□□□ 0.11
DDX56-210ENST00000479440 CDK18Q07002 472 aa15.74■□□□□ 0.11
DDX56-210ENST00000479440 NIPAL4Q0D2K0 466 aa15.74■□□□□ 0.11
DDX56-210ENST00000479440 GALNT3Q14435 633 aa15.74■□□□□ 0.11
DDX56-210ENST00000479440 GPR19Q15760 415 aa15.74■□□□□ 0.11
DDX56-210ENST00000479440 LYPLAL1Q5VWZ2 237 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms