RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 GOLGA8TH3BQL2 631 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 CASC3O15234 703 aaKnown RBP6.79□□□□□ -1.32
BRCA1-215ENST00000478531 RAD51CO43502 376 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 NOBOXO60393 691 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 BANF1O75531 89 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 EML2O95834 649 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 RPL10P27635 214 aaKnown RBP6.79□□□□□ -1.32
BRCA1-215ENST00000478531 FOXN2P32314 431 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 PPM1FP49593 454 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-215ENST00000478531 ITGA8P53708 1063 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 DRG2P55039 364 aaKnown RBP6.79□□□□□ -1.32
BRCA1-215ENST00000478531 B4GALNT1Q00973 533 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 CKAP4Q07065 602 aaKnown RBP6.79□□□□□ -1.32
BRCA1-215ENST00000478531 DBN1Q16643 649 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 C14orf28Q4W4Y0 310 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 FASTKD1Q53R41 847 aaKnown RBP6.79□□□□□ -1.32
BRCA1-215ENST00000478531 PERM1Q5SV97 790 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 PCGF5Q86SE9 256 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 MARCH9Q86YJ5 346 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 Q8N9G6 341 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-215ENST00000478531 MCUQ8NE86 351 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 OR4L1Q8NH43 312 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 MAPK15Q8TD08 544 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 ZNF669Q96BR6 464 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-215ENST00000478531 SNF8Q96H20 258 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 C19orf43Q9BQ61 176 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 TIMM29Q9BSF4 260 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 ABCG4Q9H172 646 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 DPH5Q9H2P9 285 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 PRDM8Q9NQV8 689 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 CATSPERZQ9NTU4 200 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 TBC1D29Q9UFV1 150 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 CDC23Q9UJX2 597 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 SOX13Q9UN79 622 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 COL27A1Q8IZC6 1860 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-215ENST00000478531 TRBV5-4A0A0C4DH59 114 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 FAM149AA5PLN7 773 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 SDR42E2A6NKP2 422 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 RHPN2P1A8MT19 583 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 AGAP14A8MT82 685 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 KIF2AO00139 706 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-215ENST00000478531 OR1I1O60431 355 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 VAPBO95292 243 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 TRIM16O95361 564 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 MLNP12872 115 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 ATP1B2P14415 290 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-215ENST00000478531 VCLP18206 1134 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 RPL21P46778 160 aaKnown RBP6.78□□□□□ -1.32
BRCA1-215ENST00000478531 NFE2L1Q14494 772 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 HLTFQ14527 1009 aaKnown RBP eCLIP6.78□□□□□ -1.323e-6■■□□□ 13.4
BRCA1-215ENST00000478531 BBS9Q3SYG4 887 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 HP1BP3Q5SSJ5 553 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-215ENST00000478531 HES3Q5TGS1 186 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 C11orf96Q7Z7L8 435 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 LDB1Q86U70 411 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-215ENST00000478531 HOOK3Q86VS8 718 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 AMZ2Q86W34 360 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 ZNF761Q86XN6 746 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-215ENST00000478531 NAGSQ8N159 534 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 CLDN19Q8N6F1 224 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 GPR156Q8NFN8 814 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 SLC37A2Q8TED4 501 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 ADAMTS14Q8WXS8 1223 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 NAT6Q93015 286 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 PWWP2AQ96N64 755 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 CCDC3Q9BQI4 270 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 KIFC1Q9BW19 673 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 SCNM1Q9BWG6 230 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 TREX1Q9NSU2 369 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 ZDHHC3Q9NYG2 299 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 MARCH4Q9P2E8 410 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-215ENST00000478531 RABGEF1Q9UJ41 708 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 ANAPC5Q9UJX4 755 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 KLK13Q9UKR3 277 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 RIMKLBQ9ULI2 386 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 SNX24Q9Y343 169 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 PCDHGA1Q9Y5H4 931 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 RNF215Q9Y6U7 377 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 ACACAQ13085 2346 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 USP24Q9UPU5 2620 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 EME2A4GXA9 379 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-215ENST00000478531 CD3EAPO15446 510 aaKnown RBP6.78□□□□□ -1.32
BRCA1-215ENST00000478531 POP7O75817 140 aaKnown RBP6.78□□□□□ -1.32
BRCA1-215ENST00000478531 SEC31AO94979 1220 aaKnown RBP6.78□□□□□ -1.32
BRCA1-215ENST00000478531 GP1BAP07359 652 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 F7P08709 466 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-215ENST00000478531 F3P13726 295 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 PAMP19021 973 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 IVDP26440 423 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 PMLP29590 882 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 ACVR1Q04771 509 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 DHX9Q08211 1270 aaKnown RBP6.78□□□□□ -1.32
BRCA1-215ENST00000478531 ILKQ13418 452 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 SEMA3AQ14563 771 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 MORF4L2Q15014 288 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 WHAMMP3Q1A5X7 153 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 MSS51Q4VC12 460 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 DNAJC21Q5F1R6 531 aaKnown RBP6.78□□□□□ -1.32
BRCA1-215ENST00000478531 C8orf74Q6P047 294 aa6.78□□□□□ -1.32
BRCA1-215ENST00000478531 FAM83HQ6ZRV2 1179 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms