RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 CHRNA1P02708 482 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 PAICSP22234 425 aaKnown RBP14.07□□□□□ -0.16
NPHP4-208ENST00000478423 SOX6P35712 828 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 SLC18A1P54219 525 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 ECT2LQ008S8 904 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 ZNF33AQ06730 810 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 GSTA3Q16772 222 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 PLEKHG4Q58EX7 1191 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 RALGPS1Q5JS13 557 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 GLYATQ6IB77 296 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 PLEKHM3Q6ZWE6 761 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 PHF10Q8WUB8 498 aaKnown RBP14.07□□□□□ -0.16
NPHP4-208ENST00000478423 AIF1LQ9BQI0 150 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 S100A14Q9HCY8 104 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 OXSMQ9NWU1 459 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 ADGRE2Q9UHX3 823 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 MAGEL2Q9UJ55 1249 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 CAPN8A6NHC0 703 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 ZW10O43264 779 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 CAPN15O75808 1086 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 IDSP22304 550 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 SLC6A2P23975 617 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 MANFP55145 182 aaKnown RBP14.07□□□□□ -0.16
NPHP4-208ENST00000478423 FPGSQ05932 587 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 GNA13Q14344 377 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 PRKD1Q15139 912 aaPredicted RBP14.07□□□□□ -0.16
NPHP4-208ENST00000478423 ANXA8L1Q5VT79 327 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 SULT1C3Q6IMI6 304 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 PAOXQ6QHF9 649 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 C17orf99Q6UX52 265 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 ZNF366Q8N895 744 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 TERB1Q8NA31 727 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 OR2AP1Q8NGE2 309 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 PNPT1Q8TCS8 783 aaKnown RBP14.07□□□□□ -0.16
NPHP4-208ENST00000478423 CLIP3Q96DZ5 547 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 REXO5Q96IC2 774 aaKnown RBP14.07□□□□□ -0.16
NPHP4-208ENST00000478423 SPACA7Q96KW9 195 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 KCTD3Q9Y597 815 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 MYH14Q7Z406 1995 aaKnown RBP14.07□□□□□ -0.16
NPHP4-208ENST00000478423 CCDC85CA6NKD9 419 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 NBNO60934 754 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 SYN1P17600 705 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 RBM20Q5T481 1227 aaKnown RBP14.07□□□□□ -0.16
NPHP4-208ENST00000478423 CHMP1BQ7LBR1 199 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 GPRIN1Q7Z2K8 1008 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 SNX20Q7Z614 316 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 SPPL2CQ8IUH8 684 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 CIB1Q99828 191 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 EPB41L4BQ9H329 900 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 CORO2BQ9UQ03 480 aa14.07□□□□□ -0.16
NPHP4-208ENST00000478423 URADA6NGE7 173 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 ITM2AO43736 263 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 IFNA16P05015 189 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 SERINC3Q13530 473 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 GPR33Q49SQ1 333 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 KHDC1Q4VXA5 237 aaKnown RBP14.06□□□□□ -0.16
NPHP4-208ENST00000478423 RAB6CQ53S08 254 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 MTX3Q5HYI7 312 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 C16orf62Q7Z3J2 963 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 CLDN19Q8N6F1 224 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 FAM156AQ8NDB6 213 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 TSPAN14Q8NG11 270 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 RAB6CQ9H0N0 254 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 TFB2MQ9H5Q4 396 aaKnown RBP14.06□□□□□ -0.16
NPHP4-208ENST00000478423 RAB23Q9ULC3 237 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 INSL5Q9Y5Q6 135 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 ZNF487B1APH4 448 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 SLC31A1O15431 190 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 WFS1O76024 890 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 TOP3BO95985 862 aaKnown RBP14.06□□□□□ -0.16
NPHP4-208ENST00000478423 PPIBP23284 216 aaKnown RBP14.06□□□□□ -0.16
NPHP4-208ENST00000478423 IFNGR2P38484 337 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 FOLH1Q04609 750 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 CARD16Q5EG05 197 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 MBLAC2Q68D91 279 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 VN1R5Q7Z5H4 357 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 GATAD2AQ86YP4 633 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 TBC1D21Q8IYX1 336 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 KBTBD7Q8WVZ9 684 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 RERGQ96A58 199 aaPredicted RBP14.06□□□□□ -0.16
NPHP4-208ENST00000478423 MT-ND1P03886 318 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 GPAT3Q53EU6 434 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 Q6ZVU0 165 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 IGSF21Q96ID5 467 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 GPR22Q99680 433 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 HERPUD2Q9BSE4 406 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 ERVW-1Q9UQF0 538 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 GMPPBQ9Y5P6 360 aa14.06□□□□□ -0.16
NPHP4-208ENST00000478423 ANXA4P09525 319 aaPredicted RBP14.05□□□□□ -0.16
NPHP4-208ENST00000478423 NELFEP18615 380 aaKnown RBP14.05□□□□□ -0.16
NPHP4-208ENST00000478423 ERVK-21P61565 698 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 SLC18A2Q05940 514 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 RGS1Q08116 209 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 ZNF296Q8WUU4 475 aaPredicted RBP14.05□□□□□ -0.16
NPHP4-208ENST00000478423 SEC14L1Q92503 715 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 SQORQ9Y6N5 450 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 MYO18AQ92614 2054 aaKnown RBP14.05□□□□□ -0.16
NPHP4-208ENST00000478423 NAV1Q8NEY1 1877 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 ARHGEF9O43307 516 aa14.05□□□□□ -0.16
NPHP4-208ENST00000478423 OR10H2O60403 315 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms