RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 OR5K3A6NET4 321 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 LRRC72A6NJI9 287 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 ZBTB43O43298 467 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 PLPP2O43688 288 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 PLOD3O60568 738 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 KRT36O76013 467 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 F7P08709 466 aaPredicted RBP3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 AMD1P17707 334 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 KCNA5P22460 613 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 HRH2P25021 359 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 GCH1P30793 250 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 CTSCP53634 463 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 ILF3Q12906 894 aaKnown RBP eCLIP3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 ACVR2BQ13705 512 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 KCNC3Q14003 757 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 MVPQ14764 893 aaKnown RBP3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 OR7E24Q6IFN5 339 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 TPRG1Q6ZUI0 275 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 C9orf139Q6ZV77 190 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 PLEKHM3Q6ZWE6 761 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 SLC9B2Q86UD5 537 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 MCEMP1Q8IX19 187 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 TAGAPQ8N103 731 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 GCSAMQ8N6F7 178 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 LSMEM1Q8N8F7 131 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 CALML4Q96GE6 196 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 AP1M1Q9BXS5 423 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 CCDC68Q9H2F9 335 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 HRH4Q9H3N8 390 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 RAD21L1Q9H4I0 556 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 DNAJC18Q9H819 358 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 TCP11L1Q9NUJ3 509 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 ABCF3Q9NUQ8 709 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 CWC25Q9NXE8 425 aaPredicted RBP3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 SUCLA2Q9P2R7 463 aaPredicted RBP3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 ICAM5Q9UMF0 924 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 EXO1Q9UQ84 846 aaKnown RBP3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 DLGAP4Q9Y2H0 992 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 TMEM184BQ9Y519 407 aaPredicted RBP3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 SCN5AQ14524 2016 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 ZCWPW2A0A1B0GU75 182 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 TMEM8BA6NDV4 472 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 ANKRD66B4E2M5 251 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 EIF3DO15371 548 aaKnown RBP eCLIP3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 BUD23O43709 281 aaKnown RBP3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 MITFO75030 526 aaPredicted RBP3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 ZNF217O75362 1048 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 GH2P01242 217 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 CETPP11597 493 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 NR2F2P24468 414 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 SLC15A1P46059 708 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 FMO5P49326 533 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 SNX16P57768 344 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 PITX1P78337 314 aaPredicted RBP3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 ROR1Q01973 937 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 EPS8Q12929 822 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 MEP1AQ16819 746 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 ACCSLQ4AC99 568 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 ZDHHC20Q5W0Z9 365 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 RAD9BQ6WBX8 426 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 FOXL2NBQ6ZUU3 175 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 BHLHA9Q7RTU4 235 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 ATG9AQ7Z3C6 839 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 NR2C2APQ86WQ0 139 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 METTL27Q8N6F8 245 aaPredicted RBP3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 PHF21AQ96BD5 680 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 DACH2Q96NX9 599 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 DDOQ99489 341 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 LRRC1Q9BTT6 524 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 KRTAP1-5Q9BYS1 174 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 PAG1Q9NWQ8 432 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 TRMT1Q9NXH9 659 aaKnown RBP3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 DONSONQ9NYP3 566 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 KCNG2Q9UJ96 466 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 TMEM5Q9Y2B1 443 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 B3GALT5Q9Y2C3 310 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 ZNF711Q9Y462 761 aa3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.79□□□□□ -1.8
SMARCA1-204ENST00000478420 PRAG1Q86YV5 1406 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 ZNF644Q9H582 1327 aaPredicted RBP3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 hCG_1807616A0A1W2PRN6 198 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 SYNDIG1LA6NDD5 238 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 KRTAP29-1A8MX34 341 aaPredicted RBP3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 C16orf97H3BN30 126 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 TMEM178BH3BS89 294 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 CTDSP2O14595 271 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 ATP1A1P05023 1023 aaKnown RBP3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 MMP9P14780 707 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 PORP16435 677 aaPredicted RBP3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 ZNF23P17027 643 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 AHRP35869 848 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 KRT20P35900 424 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 MMP14P50281 582 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 MLLT10P55197 1068 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 DLX5P56178 289 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 CD81P60033 236 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 SPOCK1Q08629 439 aa3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 ZRSR1Q15695 479 aaKnown RBP3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 CCDC92Q53HC0 331 aaPredicted RBP3.78□□□□□ -1.8
SMARCA1-204ENST00000478420 FAM76BQ5HYJ3 339 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms