RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 DENND6AQ8IWF6 608 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 RBFAQ8N0V3 343 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 RASGEF1AQ8N9B8 481 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 GSDMBQ8TAX9 411 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 RUBCNQ92622 972 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 ULK4Q96C45 1275 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 CERS2Q96G23 380 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 CDK15Q96Q40 435 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 COPS8Q99627 209 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 GTPBP2Q9BX10 602 aaKnown RBP11.32□□□□□ -0.6
CBWD3-206ENST00000478048 CDC42EP4Q9H3Q1 356 aaKnown RBP11.32□□□□□ -0.6
CBWD3-206ENST00000478048 CYP4F12Q9HCS2 524 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 IARS2Q9NSE4 1012 aaKnown RBP11.32□□□□□ -0.6
CBWD3-206ENST00000478048 DNAJC28Q9NX36 388 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 ZDHHC3Q9NYG2 299 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 KLQ9UEF7 1012 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 SUFUQ9UMX1 484 aa11.32□□□□□ -0.6
CBWD3-206ENST00000478048 ZNF292O60281 2723 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 IGLV3-16A0A075B6K0 115 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 CDK14O94921 469 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 CSF2P04141 144 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 KELP23276 732 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 SLC1A2P43004 574 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 CTSCP53634 463 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 IL9RQ01113 521 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 PPARDQ03181 441 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 THOC5Q13769 683 aaKnown RBP11.31□□□□□ -0.6
CBWD3-206ENST00000478048 SHBQ15464 509 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 ZNF789Q5FWF6 425 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 ZNF470Q6ECI4 717 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 CILP2Q8IUL8 1156 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 RELL1Q8IUW5 271 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 HID1Q8IV36 788 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 ASCC3Q8N3C0 2202 aaKnown RBP11.31□□□□□ -0.6
CBWD3-206ENST00000478048 CLDN19Q8N6F1 224 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 OTUD6BQ8N6M0 293 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 GPR161Q8N6U8 529 aaKnown RBP11.31□□□□□ -0.6
CBWD3-206ENST00000478048 SGF29Q96ES7 293 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 SCARF2Q96GP6 870 aaPredicted RBP11.31□□□□□ -0.6
CBWD3-206ENST00000478048 ARHGEF17Q96PE2 2063 aaPredicted RBP11.31□□□□□ -0.6
CBWD3-206ENST00000478048 ELF4Q99607 663 aaPredicted RBP11.31□□□□□ -0.6
CBWD3-206ENST00000478048 PARD6BQ9BYG5 372 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 GAREM1Q9H706 876 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 CARS2Q9HA77 564 aaKnown RBP11.31□□□□□ -0.6
CBWD3-206ENST00000478048 PPANQ9NQ55 473 aaKnown RBP11.31□□□□□ -0.6
CBWD3-206ENST00000478048 SMYD2Q9NRG4 433 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 TM7SF3Q9NS93 570 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 MOCS1Q9NZB8 636 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 NINJ2Q9NZG7 142 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 VPS18Q9P253 973 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 PRSS21Q9Y6M0 314 aa11.31□□□□□ -0.6
CBWD3-206ENST00000478048 ZFC3H1O60293 1989 aaKnown RBP11.3□□□□□ -0.6
CBWD3-206ENST00000478048 TCRBV9S1A1TA0A576 114 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 OR2AG2A6NM03 316 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 H3BM21 787 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 TNFRSF10CO14798 259 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 SGTAO43765 313 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 VEGFDO43915 354 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 NUAK1O60285 661 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 SDC3O75056 442 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 F12P00748 615 aaPredicted RBP11.3□□□□□ -0.6
CBWD3-206ENST00000478048 IVLP07476 585 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 NME1P15531 152 aaKnown RBP11.3□□□□□ -0.6
CBWD3-206ENST00000478048 MSH3P20585 1137 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 GNPDA1P46926 289 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 HK3P52790 923 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 WDR4P57081 412 aaKnown RBP11.3□□□□□ -0.6
CBWD3-206ENST00000478048 MPP1Q00013 466 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 BNIP3Q12983 259 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 CSRP2Q16527 193 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 ZNF423Q2M1K9 1284 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 MRNIPQ6NTE8 343 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 WDR93Q6P2C0 686 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 CRTC3Q6UUV7 619 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 CERS6Q6ZMG9 384 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 ZNF547Q8IVP9 402 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 PHACTR4Q8IZ21 702 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 BEND7Q8N7W2 519 aaPredicted RBP11.3□□□□□ -0.6
CBWD3-206ENST00000478048 EIF1ADQ8N9N8 165 aaKnown RBP11.3□□□□□ -0.6
CBWD3-206ENST00000478048 GPR150Q8NGU9 434 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.3□□□□□ -0.6
CBWD3-206ENST00000478048 TTC25Q96NG3 672 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 TSPYL1Q9H0U9 437 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 TMEM168Q9H0V1 697 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 ERVMER34-1Q9H9K5 563 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 PLEKHM1Q9Y4G2 1056 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 ST14Q9Y5Y6 855 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 DGKBQ9Y6T7 804 aa11.3□□□□□ -0.6
CBWD3-206ENST00000478048 GOLGA4Q13439 2230 aaKnown RBP11.3□□□□□ -0.6
CBWD3-206ENST00000478048 CXorf49A8MYA2 514 aaPredicted RBP11.29□□□□□ -0.6
CBWD3-206ENST00000478048 CDX4O14627 284 aaPredicted RBP11.29□□□□□ -0.6
CBWD3-206ENST00000478048 CHUKO15111 745 aa11.29□□□□□ -0.6
CBWD3-206ENST00000478048 LRP3O75074 770 aa11.29□□□□□ -0.6
CBWD3-206ENST00000478048 RASGRP1O95267 797 aa11.29□□□□□ -0.6
CBWD3-206ENST00000478048 C1QAP02745 245 aa11.29□□□□□ -0.6
CBWD3-206ENST00000478048 CELA2BP08218 269 aaPredicted RBP11.29□□□□□ -0.6
CBWD3-206ENST00000478048 SYPP08247 313 aa11.29□□□□□ -0.6
CBWD3-206ENST00000478048 ATP1B2P14415 290 aaPredicted RBP11.29□□□□□ -0.6
CBWD3-206ENST00000478048 OGNP20774 298 aaKnown RBP11.29□□□□□ -0.6
CBWD3-206ENST00000478048 PMLP29590 882 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms