RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	LILRA5	A6NI73	299 aa		13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	EIF4E1B	A6NMX2	242 aa	Known RBP	13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	GAPDHS	O14556	408 aa	Predicted RBP	13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	PRAMEF1	O95521	474 aa		13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	VIP	P01282	170 aa		13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	THRA	P10827	490 aa		13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	CCL4	P13236	92 aa		13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	RPL10	P27635	214 aa	Known RBP	13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	SLC19A1	P41440	591 aa		13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	MAPK9	P45984	424 aa		13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	UBE2I	P63279	158 aa	Known RBP	13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	SPARCL1	Q14515	664 aa		13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	SEPT7	Q16181	437 aa	Known RBP	13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	GPRC6A	Q5T6X5	926 aa		13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	ARHGAP40	Q5TG30	622 aa		13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	ABRAXAS1	Q6UWZ7	409 aa		13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	WASH2P	Q6VEQ5	465 aa		13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	CCDC81	Q6ZN84	652 aa		13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	C11orf96	Q7Z7L8	435 aa		13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	AMZ2	Q86W34	360 aa		13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	RASGEF1A	Q8N9B8	481 aa		13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	FAM71D	Q8N9W8	422 aa		13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	TAAR9	Q96RI9	348 aa		13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	CCNL2	Q96S94	520 aa	Predicted RBP	13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	TMEM121	Q9BTD3	319 aa		13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	UCK1	Q9HA47	277 aa		13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	WASH6P	Q9NQA3	447 aa		13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	SCHIP1	Q9P0W5	487 aa	Predicted RBP	13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	PDP2	Q9P2J9	529 aa		13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	SDK2	Q58EX2	2172 aa		13.58	□□□□□ -0.24
HDAC7-222	ENST00000477937	PRR19	A6NJB7	356 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	OR2AG2	A6NM03	316 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937		A8MU76	341 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	C9orf172	C9J069	976 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	ARHGAP6	O43182	974 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	GPR39	O43194	453 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	PSMD3	O43242	534 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	POP7	O75817	140 aa	Known RBP	13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	SRP72	O76094	671 aa	Known RBP	13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	LIPC	P11150	499 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	FGF3	P11487	239 aa	Predicted RBP	13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	MSH3	P20585	1137 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	CD82	P27701	267 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	AKT1	P31749	480 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	HADHA	P40939	763 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	DRG2	P55039	364 aa	Known RBP	13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	MSLN	Q13421	630 aa	Predicted RBP	13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	LONRF2	Q1L5Z9	754 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	P3H1	Q32P28	736 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	SNAP47	Q5SQN1	464 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	SEL1L2	Q5TEA6	688 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	AGAP9	Q5VTM2	703 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	DENND5A	Q6IQ26	1287 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	TMEM220	Q6QAJ8	160 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	TMEM26	Q6ZUK4	368 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	PLXDC1	Q8IUK5	500 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	KLHDC8B	Q8IXV7	354 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	SLC35B2	Q8TB61	432 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	CXorf40B	Q96DE9	158 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	ZNF514	Q96K75	400 aa	Predicted RBP	13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	BBC3	Q96PG8	261 aa	Predicted RBP	13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	C19orf43	Q9BQ61	176 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	TBC1D10A	Q9BXI6	508 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	ASB8	Q9H765	288 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	POT1	Q9NUX5	634 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	SMOX	Q9NWM0	555 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	ZNF624	Q9P2J8	865 aa	Predicted RBP	13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	R3HDM2	Q9Y2K5	976 aa	Known RBP	13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	KCTD3	Q9Y597	815 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	PCDHB11	Q9Y5F2	797 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	PIKFYVE	Q9Y2I7	2098 aa		13.57	□□□□□ -0.24
HDAC7-222	ENST00000477937	TCRBV7S2A1N4T	A0A589	114 aa		13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	EFCAB7	A8K855	629 aa		13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937		B4E171	279 aa		13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937		K7ENP7	123 aa		13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	BRAF	P15056	766 aa		13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	AMD1	P17707	334 aa		13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	STIP1	P31948	543 aa	Known RBP	13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	CA5A	P35218	305 aa		13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	TSPAN7	P41732	249 aa		13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	HAL	P42357	657 aa		13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	RHD	Q02161	417 aa		13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	DMPK	Q09013	629 aa		13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	TGIF1	Q15583	401 aa		13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	KCTD11	Q693B1	232 aa		13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	INO80C	Q6PI98	192 aa	Predicted RBP	13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	ZFAND4	Q86XD8	727 aa		13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	FAM129C	Q86XR2	697 aa		13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	RBM12B	Q8IXT5	1001 aa	Known RBP	13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	OR13C4	Q8NGS5	318 aa		13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	SNRNP27	Q8WVK2	155 aa	Known RBP	13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	ART4	Q93070	314 aa		13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	LRRC40	Q9H9A6	602 aa		13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	SLC40A1	Q9NP59	571 aa		13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	SLC39A1	Q9NY26	324 aa		13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	FOXJ2	Q9P0K8	574 aa		13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	FKBPL	Q9UIM3	349 aa		13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	CRLS1	Q9UJA2	301 aa		13.56	□□□□□ -0.24
HDAC7-222	ENST00000477937	KLHL33	A6NCF5	533 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms