RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 C2orf73Q8N5S3 287 aaPredicted RBP9.67□□□□□ -0.86
CMC1-209ENST00000477739 CPSF7Q8N684 471 aaKnown RBP9.67□□□□□ -0.86
CMC1-209ENST00000477739 MYLIPQ8WY64 445 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 IRGQQ8WZA9 623 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 SERPINB11Q96P15 392 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 KIFC1Q9BW19 673 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 DUS2Q9NX74 493 aaKnown RBP9.67□□□□□ -0.86
CMC1-209ENST00000477739 TMA7Q9Y2S6 64 aaKnown RBP9.67□□□□□ -0.86
CMC1-209ENST00000477739 A0A087X1B8 175 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 PRSS51A0A1B0GVH4 220 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 H3BNH8 94 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 M0R129 80 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 FGF10O15520 208 aaPredicted RBP9.67□□□□□ -0.86
CMC1-209ENST00000477739 DFNA5O60443 496 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 MITFO75030 526 aaPredicted RBP9.67□□□□□ -0.86
CMC1-209ENST00000477739 ELNP15502 786 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 CYP2C18P33260 490 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 MAP2K4P45985 399 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 IDH2P48735 452 aaKnown RBP9.67□□□□□ -0.86
CMC1-209ENST00000477739 PRKAA2P54646 552 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 TRIM32Q13049 653 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 HNRNPDQ14103 355 aaKnown RBP9.67□□□□□ -0.86
CMC1-209ENST00000477739 ZNF678Q5SXM1 525 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 ENPP6Q6UWR7 440 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 APLFQ8IW19 511 aaPredicted RBP9.67□□□□□ -0.86
CMC1-209ENST00000477739 ARHGAP12Q8IWW6 846 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 DCP1BQ8IZD4 617 aaKnown RBP9.67□□□□□ -0.86
CMC1-209ENST00000477739 ATG16L2Q8NAA4 619 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 HPS1Q92902 700 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 TMBIM1Q969X1 311 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 MYEOVQ96EZ4 313 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 OSBPL6Q9BZF3 934 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 GSTO2Q9H4Y5 243 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 PAIP2BQ9ULR5 123 aaKnown RBP9.67□□□□□ -0.86
CMC1-209ENST00000477739 MUSKO15146 869 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 CYP7B1O75881 506 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 RECQL5O94762 991 aaPredicted RBP9.66□□□□□ -0.86
CMC1-209ENST00000477739 DLGAP3O95886 979 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 CYBBP04839 570 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 SEMA3BQ13214 749 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 CRHR2Q13324 411 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 RAB41Q5JT25 222 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 BRMS1LQ5PSV4 323 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 BTLAQ7Z6A9 289 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 SYTL1Q8IYJ3 562 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 FRS2Q8WU20 508 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 NRBF2Q96F24 287 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 C9orf16Q9BUW7 83 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 ARHGAP39Q9C0H5 1083 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 SMPD3Q9NY59 655 aaPredicted RBP9.66□□□□□ -0.86
CMC1-209ENST00000477739 ADGRE2Q9UHX3 823 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 CD84Q9UIB8 345 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 VPS51Q9UID3 782 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 TMCO1Q9UM00 188 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 FCF1Q9Y324 198 aaKnown RBP9.66□□□□□ -0.86
CMC1-209ENST00000477739 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.66□□□□□ -0.86
CMC1-209ENST00000477739 CFAP99D6REC4 459 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 TBC1D4O60343 1298 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 GBAP04062 536 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 DBTP11182 482 aaKnown RBP9.66□□□□□ -0.86
CMC1-209ENST00000477739 ITPKAP23677 461 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 CLK1P49759 484 aaKnown RBP9.66□□□□□ -0.86
CMC1-209ENST00000477739 POLR2JP52435 117 aaKnown RBP9.66□□□□□ -0.86
CMC1-209ENST00000477739 NUDT6P53370 316 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 TP53BP2Q13625 1128 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 LRP8Q14114 963 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 PYCR3Q53H96 274 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 DENND5AQ6IQ26 1287 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 PSAPL1Q6NUJ1 521 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 CLEC14AQ86T13 490 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 SLC22A9Q8IVM8 553 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 CLIP4Q8N3C7 705 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 ZNF555Q8NEP9 628 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 BIRC7Q96CA5 298 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 GPR78Q96P69 363 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 FCRL5Q96RD9 977 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 ZBTB18Q99592 522 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 HERC2P3Q9BVR0 1158 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 ATG10Q9H0Y0 220 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 NSUN3Q9H649 340 aaKnown RBP9.66□□□□□ -0.86
CMC1-209ENST00000477739 RPF2Q9H7B2 306 aaKnown RBP9.66□□□□□ -0.86
CMC1-209ENST00000477739 ACTR8Q9H981 624 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 MAP10Q9P2G4 905 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 ORC6Q9Y5N6 252 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 OTOFQ9HC10 1997 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 BRCA1P38398 1863 aaKnown RBP9.66□□□□□ -0.86
CMC1-209ENST00000477739 A0A0U1RQF3 1178 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 UNCXA6NJT0 531 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 HHLA1C9JL84 531 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 COL6A1P12109 1028 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 SLC6A2P23975 617 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 RGRP47804 291 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 CLCN5P51795 746 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 FCGRTP55899 365 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 VBP1P61758 197 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 TGFBIQ15582 683 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 KCTD11Q693B1 232 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 PRSS55Q6UWB4 352 aaPredicted RBP9.66□□□□□ -0.86
CMC1-209ENST00000477739 RNF19BQ6ZMZ0 732 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 R3HCC1LQ7Z5L2 792 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms