RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 TMEM115Q12893 351 aaPredicted RBP17.39■□□□□ 0.38
PTPN7-209ENST00000477554 POU6F1Q14863 301 aa17.39■□□□□ 0.38
PTPN7-209ENST00000477554 PPP1R7Q15435 360 aa17.39■□□□□ 0.38
PTPN7-209ENST00000477554 CCDC38Q502W7 563 aa17.39■□□□□ 0.38
PTPN7-209ENST00000477554 FAM83HQ6ZRV2 1179 aaPredicted RBP17.39■□□□□ 0.38
PTPN7-209ENST00000477554 DET1Q7L5Y6 550 aa17.39■□□□□ 0.38
PTPN7-209ENST00000477554 GDAP1Q8TB36 358 aa17.39■□□□□ 0.38
PTPN7-209ENST00000477554 HNRNPLLQ8WVV9 542 aaKnown RBP17.39■□□□□ 0.38
PTPN7-209ENST00000477554 OSGEPL1Q9H4B0 414 aa17.39■□□□□ 0.38
PTPN7-209ENST00000477554 ARNT2Q9HBZ2 717 aa17.39■□□□□ 0.38
PTPN7-209ENST00000477554 EPB41L5Q9HCM4 733 aa17.39■□□□□ 0.38
PTPN7-209ENST00000477554 ASCL3Q9NQ33 180 aa17.39■□□□□ 0.38
PTPN7-209ENST00000477554 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.39■□□□□ 0.38
PTPN7-209ENST00000477554 PKP3Q9Y446 797 aa17.39■□□□□ 0.38
PTPN7-209ENST00000477554 OR2AG2A6NM03 316 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 RHPN2P1A8MT19 583 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 SGTAO43765 313 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 TCEA3O75764 348 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 CDK14O94921 469 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 PRAMEF1O95521 474 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 RPL10P27635 214 aaKnown RBP17.38■□□□□ 0.37
PTPN7-209ENST00000477554 PTGIRP43119 386 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 TNNT3P45378 269 aaPredicted RBP17.38■□□□□ 0.37
PTPN7-209ENST00000477554 DRG2P55039 364 aaKnown RBP17.38■□□□□ 0.37
PTPN7-209ENST00000477554 LRP8Q14114 963 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 NR1D2Q14995 579 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 P3H1Q32P28 736 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 PDPK2PQ6A1A2 396 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 IYDQ6PHW0 289 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 C4orf22Q6V702 233 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 RCBTB1Q8NDN9 531 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 OR52K1Q8NGK4 314 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 BRSK1Q8TDC3 778 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 NAF1Q96HR8 494 aaKnown RBP17.38■□□□□ 0.37
PTPN7-209ENST00000477554 RAD18Q9NS91 495 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 WDR37Q9Y2I8 494 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 CHD6Q8TD26 2715 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 ADAMTS20P59510 1910 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 OR51F1A6NGY5 319 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 TTI1O43156 1089 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 RAD51CO43502 376 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 AP2A1O95782 977 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 KRT14P02533 472 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 ZNF7P17097 686 aaPredicted RBP17.38■□□□□ 0.37
PTPN7-209ENST00000477554 RPL22P35268 128 aaKnown RBP17.38■□□□□ 0.37
PTPN7-209ENST00000477554 ARSDP51689 593 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 NFATC2Q13469 925 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.38■□□□□ 0.37
PTPN7-209ENST00000477554 LRRTM4Q86VH4 590 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 JAMLQ86YT9 394 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 SLITRK4Q8IW52 837 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 LRRN4CLQ8ND94 238 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 DDHD1Q8NEL9 900 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 ZNF398Q8TD17 642 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 SRPK1Q96SB4 655 aaKnown RBP17.38■□□□□ 0.37
PTPN7-209ENST00000477554 LRRC1Q9BTT6 524 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 RAB17Q9H0T7 212 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 RMI1Q9H9A7 625 aa17.38■□□□□ 0.37
PTPN7-209ENST00000477554 ZNF624Q9P2J8 865 aaPredicted RBP17.38■□□□□ 0.37
PTPN7-209ENST00000477554 UTP11Q9Y3A2 253 aaKnown RBP17.38■□□□□ 0.37
PTPN7-209ENST00000477554 IGHV1OR21-1A0A087WYE8 117 aa17.37■□□□□ 0.37
PTPN7-209ENST00000477554 OR52A4PA6NMU1 304 aa17.37■□□□□ 0.37
PTPN7-209ENST00000477554 SRP72O76094 671 aaKnown RBP17.37■□□□□ 0.37
PTPN7-209ENST00000477554 PNLIPP16233 465 aa17.37■□□□□ 0.37
PTPN7-209ENST00000477554 ITIH1P19827 911 aa17.37■□□□□ 0.37
PTPN7-209ENST00000477554 PBLDP30039 288 aaPredicted RBP17.37■□□□□ 0.37
PTPN7-209ENST00000477554 EIF2S3P41091 472 aaKnown RBP17.37■□□□□ 0.37
PTPN7-209ENST00000477554 ETV5P41161 510 aa17.37■□□□□ 0.37
PTPN7-209ENST00000477554 TERF1P54274 439 aa17.37■□□□□ 0.37
PTPN7-209ENST00000477554 ZFP36L1Q07352 338 aaKnown RBP17.37■□□□□ 0.37
PTPN7-209ENST00000477554 PTK6Q13882 451 aa17.37■□□□□ 0.37
PTPN7-209ENST00000477554 SEPT6Q14141 434 aa17.37■□□□□ 0.37
PTPN7-209ENST00000477554 C16orf72Q14CZ0 275 aa17.37■□□□□ 0.37
PTPN7-209ENST00000477554 INSCQ1MX18 579 aa17.37■□□□□ 0.37
PTPN7-209ENST00000477554 TEX35Q5T0J7 233 aa17.37■□□□□ 0.37
PTPN7-209ENST00000477554 TRAPPC5Q8IUR0 188 aa17.37■□□□□ 0.37
PTPN7-209ENST00000477554 LILRA3Q8N6C8 439 aaPredicted RBP17.37■□□□□ 0.37
PTPN7-209ENST00000477554 OR6C4Q8NGE1 309 aa17.37■□□□□ 0.37
PTPN7-209ENST00000477554 UBXN4Q92575 508 aa17.37■□□□□ 0.37
PTPN7-209ENST00000477554 PMEPA1Q969W9 287 aa17.37■□□□□ 0.37
PTPN7-209ENST00000477554 SGF29Q96ES7 293 aa17.37■□□□□ 0.37
PTPN7-209ENST00000477554 ZNF778Q96MU6 729 aa17.37■□□□□ 0.37
PTPN7-209ENST00000477554 TBC1D10AQ9BXI6 508 aa17.37■□□□□ 0.37
PTPN7-209ENST00000477554 ASB8Q9H765 288 aa17.37■□□□□ 0.37
PTPN7-209ENST00000477554 LRRC40Q9H9A6 602 aa17.37■□□□□ 0.37
PTPN7-209ENST00000477554 POLR1BQ9H9Y6 1135 aa17.37■□□□□ 0.37
PTPN7-209ENST00000477554 PAK5Q9P286 719 aa17.37■□□□□ 0.37
PTPN7-209ENST00000477554 SLC2A6Q9UGQ3 507 aa17.37■□□□□ 0.37
PTPN7-209ENST00000477554 C2orf81A6NN90 581 aa17.36■□□□□ 0.37
PTPN7-209ENST00000477554 F3P13726 295 aa17.36■□□□□ 0.37
PTPN7-209ENST00000477554 LSSP48449 732 aa17.36■□□□□ 0.37
PTPN7-209ENST00000477554 INHBCP55103 352 aa17.36■□□□□ 0.37
PTPN7-209ENST00000477554 NFE2L1Q14494 772 aa17.36■□□□□ 0.37
PTPN7-209ENST00000477554 CLCA4Q14CN2 919 aa17.36■□□□□ 0.37
PTPN7-209ENST00000477554 TBC1D25Q3MII6 688 aa17.36■□□□□ 0.37
PTPN7-209ENST00000477554 TMEM220Q6QAJ8 160 aa17.36■□□□□ 0.37
PTPN7-209ENST00000477554 PIANPQ8IYJ0 282 aa17.36■□□□□ 0.37
PTPN7-209ENST00000477554 JPH3Q8WXH2 748 aaPredicted RBP17.36■□□□□ 0.37
PTPN7-209ENST00000477554 FAM8A1Q9UBU6 413 aa17.36■□□□□ 0.37
PTPN7-209ENST00000477554 NEU2Q9Y3R4 380 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms