RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 PCSK2P16519 638 aa14.48□□□□□ -0.09
HDAC6-220ENST00000477528 PPP2R1BP30154 601 aa14.48□□□□□ -0.09
HDAC6-220ENST00000477528 CTNNB1P35222 781 aa14.48□□□□□ -0.09
HDAC6-220ENST00000477528 KRT20P35900 424 aa14.48□□□□□ -0.09
HDAC6-220ENST00000477528 RPL26P61254 145 aaKnown RBP14.48□□□□□ -0.09
HDAC6-220ENST00000477528 TRIM16LQ309B1 348 aa14.48□□□□□ -0.09
HDAC6-220ENST00000477528 OTULINQ96BN8 352 aa14.48□□□□□ -0.09
HDAC6-220ENST00000477528 HBEGFQ99075 208 aa14.48□□□□□ -0.09
HDAC6-220ENST00000477528 ABCG8Q9H221 673 aa14.48□□□□□ -0.09
HDAC6-220ENST00000477528 COQ10BQ9H8M1 238 aa14.48□□□□□ -0.09
HDAC6-220ENST00000477528 EME2A4GXA9 379 aaPredicted RBP14.47□□□□□ -0.09
HDAC6-220ENST00000477528 FAM149AA5PLN7 773 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 OAZ2O95190 189 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 ELFN1P0C7U0 828 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 ZNF678Q5SXM1 525 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 FAM91A1Q658Y4 838 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 RAET1GQ6H3X3 334 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 CEP97Q8IW35 865 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 PHACTR4Q8IZ21 702 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 OLIG1Q8TAK6 271 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 TDRD1Q9BXT4 1180 aaKnown RBP14.47□□□□□ -0.09
HDAC6-220ENST00000477528 A0A088AWK7 358 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 E7ENX8 843 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 CYBAP13498 195 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 ITPKAP23677 461 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 C16orf72Q14CZ0 275 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 GPR33Q49SQ1 333 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 ZCCHC8Q6NZY4 707 aaKnown RBP14.47□□□□□ -0.09
HDAC6-220ENST00000477528 ZMIZ2Q8NF64 920 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 QRFPRQ96P65 431 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 PAIP1Q9H074 479 aaKnown RBP14.47□□□□□ -0.09
HDAC6-220ENST00000477528 NLE1Q9NVX2 485 aaPredicted RBP14.47□□□□□ -0.09
HDAC6-220ENST00000477528 SMPD3Q9NY59 655 aaPredicted RBP14.47□□□□□ -0.09
HDAC6-220ENST00000477528 TULP3O75386 442 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 CRATP43155 626 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 DOK6Q6PKX4 331 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 LRRTM3Q86VH5 581 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 RAVER1Q8IY67 606 aaKnown RBP14.47□□□□□ -0.09
HDAC6-220ENST00000477528 IGSF8Q969P0 613 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 APOLD1Q96LR9 279 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 RETREG1Q9H6L5 497 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 TEKT2Q9UIF3 430 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 G3V2T6 193 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 FFAR2O15552 330 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 BCAS2O75934 225 aaPredicted RBP14.47□□□□□ -0.09
HDAC6-220ENST00000477528 PPIBP23284 216 aaKnown RBP14.47□□□□□ -0.09
HDAC6-220ENST00000477528 INO80DQ53TQ3 878 aaPredicted RBP14.47□□□□□ -0.09
HDAC6-220ENST00000477528 GLB1L3Q8NCI6 653 aaPredicted RBP14.47□□□□□ -0.09
HDAC6-220ENST00000477528 FAM83DQ9H4H8 585 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 TLE6Q9H808 572 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 KCNK13Q9HB14 408 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 ASB3Q9Y575 518 aa14.47□□□□□ -0.09
HDAC6-220ENST00000477528 SCN9AQ15858 1988 aa14.46□□□□□ -0.09
HDAC6-220ENST00000477528 A0A1W2PQ45 241 aaPredicted RBP14.46□□□□□ -0.09
HDAC6-220ENST00000477528 A0A1W2PQY0 241 aa14.46□□□□□ -0.09
HDAC6-220ENST00000477528 ELOVL7A1L3X0 281 aa14.46□□□□□ -0.09
HDAC6-220ENST00000477528 ANKDD1BA6NHY2 528 aa14.46□□□□□ -0.09
HDAC6-220ENST00000477528 H3BNX3 289 aa14.46□□□□□ -0.09
HDAC6-220ENST00000477528 GMPRP36959 345 aa14.46□□□□□ -0.09
HDAC6-220ENST00000477528 KIR3DL1P43629 444 aa14.46□□□□□ -0.09
HDAC6-220ENST00000477528 MAPK9P45984 424 aa14.46□□□□□ -0.09
HDAC6-220ENST00000477528 KRT78Q8N1N4 520 aa14.46□□□□□ -0.09
HDAC6-220ENST00000477528 CXorf40AQ8TE69 158 aa14.46□□□□□ -0.09
HDAC6-220ENST00000477528 H2AFY2Q9P0M6 372 aaPredicted RBP14.46□□□□□ -0.09
HDAC6-220ENST00000477528 TRPC4Q9UBN4 977 aa14.46□□□□□ -0.09
HDAC6-220ENST00000477528 DUSP12Q9UNI6 340 aa14.46□□□□□ -0.09
HDAC6-220ENST00000477528 CDC7O00311 574 aa14.46□□□□□ -0.09
HDAC6-220ENST00000477528 SDHDO14521 159 aa14.46□□□□□ -0.09
HDAC6-220ENST00000477528 TRPC1P48995 793 aa14.46□□□□□ -0.09
HDAC6-220ENST00000477528 NRG1Q02297 640 aaPredicted RBP14.46□□□□□ -0.09
HDAC6-220ENST00000477528 TGM3Q08188 693 aa14.46□□□□□ -0.09
HDAC6-220ENST00000477528 ANXA8L1Q5VT79 327 aa14.46□□□□□ -0.09
HDAC6-220ENST00000477528 SCML4Q8N228 414 aa14.46□□□□□ -0.09
HDAC6-220ENST00000477528 STX19Q8N4C7 294 aa14.46□□□□□ -0.09
HDAC6-220ENST00000477528 OVCA2Q8WZ82 227 aa14.46□□□□□ -0.09
HDAC6-220ENST00000477528 EURLQ9NYK6 297 aa14.46□□□□□ -0.09
HDAC6-220ENST00000477528 SAMD4AQ9UPU9 718 aaKnown RBP14.46□□□□□ -0.09
HDAC6-220ENST00000477528 SLC10A3P09131 477 aa14.46□□□□□ -0.1
HDAC6-220ENST00000477528 RPS9P46781 194 aaKnown RBP14.46□□□□□ -0.1
HDAC6-220ENST00000477528 DEFA1P59665 94 aa14.46□□□□□ -0.1
HDAC6-220ENST00000477528 DEFA3P59666 94 aa14.46□□□□□ -0.1
HDAC6-220ENST00000477528 SFSWAPQ12872 951 aaKnown RBP14.46□□□□□ -0.1
HDAC6-220ENST00000477528 RAB41Q5JT25 222 aa14.46□□□□□ -0.1
HDAC6-220ENST00000477528 PDSS2Q86YH6 399 aa14.46□□□□□ -0.1
HDAC6-220ENST00000477528 LRRC58Q96CX6 371 aa14.46□□□□□ -0.1
HDAC6-220ENST00000477528 CYP2S1Q96SQ9 504 aa14.46□□□□□ -0.1
HDAC6-220ENST00000477528 RHBDL2Q9NX52 303 aa14.46□□□□□ -0.1
HDAC6-220ENST00000477528 A0A0D9SEW6 157 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 TBC1D3BA6NDS4 549 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 SNTNA6NMZ2 147 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 FAM220BPB1ANY3 271 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 CXCR2P25025 360 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.45□□□□□ -0.1
HDAC6-220ENST00000477528 SGCGQ13326 291 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 PTPRCAPQ14761 206 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 RANBP10Q6VN20 620 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 RPS27LQ71UM5 84 aaKnown RBP14.45□□□□□ -0.1
HDAC6-220ENST00000477528 GPR156Q8NFN8 814 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 NAT14Q8WUY8 206 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 PSKH2Q96QS6 385 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms