RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 SEMA5BQ9P283 1151 aa9.58□□□□□ -0.88
COL4A5-204ENST00000477429 MAP10Q9P2G4 905 aa9.58□□□□□ -0.88
COL4A5-204ENST00000477429 POLEQ07864 2286 aa9.58□□□□□ -0.88
COL4A5-204ENST00000477429 C1orf232A0A0U1RR37 186 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 ANKRD62A6NC57 917 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 EIF3CLB5ME19 914 aaKnown RBP9.57□□□□□ -0.88
COL4A5-204ENST00000477429 TOX3O15405 576 aaPredicted RBP9.57□□□□□ -0.88
COL4A5-204ENST00000477429 PRPSAP2O60256 369 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 VIPP01282 170 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 HLA-DQB2P05538 268 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 CCNYL3P0C7X3 344 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 SPTBP11277 2137 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 ZNF30P17039 623 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 ZNF7P17097 686 aaPredicted RBP9.57□□□□□ -0.88
COL4A5-204ENST00000477429 ITKQ08881 620 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 ABRQ12979 859 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 DPYSL2Q16555 572 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 TDRD12Q587J7 1177 aaKnown RBP9.57□□□□□ -0.88
COL4A5-204ENST00000477429 ALG1LQ6GMV1 187 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 TMCO3Q6UWJ1 677 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 ABRAXAS1Q6UWZ7 409 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 ZNF517Q6ZMY9 492 aaPredicted RBP9.57□□□□□ -0.88
COL4A5-204ENST00000477429 FAM83HQ6ZRV2 1179 aaPredicted RBP9.57□□□□□ -0.88
COL4A5-204ENST00000477429 ATPAF2Q8N5M1 289 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 ZBTB2Q8N680 514 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 THAP4Q8WY91 577 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 MAML1Q92585 1016 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 MOCOSQ96EN8 888 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 BTBD6Q96KE9 485 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 LYSMD1Q96S90 227 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 EIF3CQ99613 913 aaKnown RBP9.57□□□□□ -0.88
COL4A5-204ENST00000477429 MLPHQ9BV36 600 aaPredicted RBP9.57□□□□□ -0.88
COL4A5-204ENST00000477429 UNKQ9C0B0 810 aaKnown RBP9.57□□□□□ -0.88
COL4A5-204ENST00000477429 HSD3B7Q9H2F3 369 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 STN1Q9H668 368 aaKnown RBP9.57□□□□□ -0.88
COL4A5-204ENST00000477429 ZWILCHQ9H900 591 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 ZBTB20Q9HC78 741 aaPredicted RBP9.57□□□□□ -0.88
COL4A5-204ENST00000477429 FGF21Q9NSA1 209 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.57□□□□□ -0.88
COL4A5-204ENST00000477429 FANCLQ9NW38 375 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 EPHA6Q9UF33 1036 aa9.57□□□□□ -0.88
COL4A5-204ENST00000477429 FARSAQ9Y285 508 aaKnown RBP9.57□□□□□ -0.88
COL4A5-204ENST00000477429 OR5K4A6NMS3 321 aa9.56□□□□□ -0.88
COL4A5-204ENST00000477429 H3BRJ5 948 aa9.56□□□□□ -0.88
COL4A5-204ENST00000477429 DDX3XO00571 662 aaKnown RBP eCLIP9.56□□□□□ -0.88
COL4A5-204ENST00000477429 GPR39O43194 453 aa9.56□□□□□ -0.88
COL4A5-204ENST00000477429 LPOP22079 712 aaPredicted RBP9.56□□□□□ -0.88
COL4A5-204ENST00000477429 ARCN1P48444 511 aaKnown RBP9.56□□□□□ -0.88
COL4A5-204ENST00000477429 EPHB1P54762 984 aa9.56□□□□□ -0.88
COL4A5-204ENST00000477429 SLC10A2Q12908 348 aaPredicted RBP9.56□□□□□ -0.88
COL4A5-204ENST00000477429 ATP1A4Q13733 1029 aa9.56□□□□□ -0.88
COL4A5-204ENST00000477429 GALNT3Q14435 633 aa9.56□□□□□ -0.88
COL4A5-204ENST00000477429 CHRNA6Q15825 494 aa9.56□□□□□ -0.88
COL4A5-204ENST00000477429 ATP13A4Q4VNC1 1196 aa9.56□□□□□ -0.88
COL4A5-204ENST00000477429 ZNF789Q5FWF6 425 aa9.56□□□□□ -0.88
COL4A5-204ENST00000477429 RALGPS1Q5JS13 557 aa9.56□□□□□ -0.88
COL4A5-204ENST00000477429 PLEKHS1Q5SXH7 462 aa9.56□□□□□ -0.88
COL4A5-204ENST00000477429 NCBP2-AS2Q69YL0 99 aa9.56□□□□□ -0.88
COL4A5-204ENST00000477429 DUS1LQ6P1R4 473 aaKnown RBP9.56□□□□□ -0.88
COL4A5-204ENST00000477429 ZNF571Q7Z3V5 609 aaPredicted RBP9.56□□□□□ -0.88
COL4A5-204ENST00000477429 SYVN1Q86TM6 617 aa9.56□□□□□ -0.88
COL4A5-204ENST00000477429 PHYKPLQ8IUZ5 450 aa9.56□□□□□ -0.88
COL4A5-204ENST00000477429 PSTKQ8IV42 348 aaKnown RBP9.56□□□□□ -0.88
COL4A5-204ENST00000477429 CNTD1Q8N815 330 aa9.56□□□□□ -0.88
COL4A5-204ENST00000477429 ENDOVQ8N8Q3 282 aaKnown RBP9.56□□□□□ -0.88
COL4A5-204ENST00000477429 ZNF501Q96CX3 271 aaPredicted RBP9.56□□□□□ -0.88
COL4A5-204ENST00000477429 RMI1Q9H9A7 625 aa9.56□□□□□ -0.88
COL4A5-204ENST00000477429 PCDH9Q9HC56 1237 aa9.56□□□□□ -0.88
COL4A5-204ENST00000477429 PARVAQ9NVD7 372 aa9.56□□□□□ -0.88
COL4A5-204ENST00000477429 RBM22Q9NW64 420 aaKnown RBP eCLIP9.56□□□□□ -0.88
COL4A5-204ENST00000477429 RARRES3Q9UL19 164 aa9.56□□□□□ -0.88
COL4A5-204ENST00000477429 CSAG2Q9Y5P2 127 aa9.56□□□□□ -0.88
COL4A5-204ENST00000477429 ARHGAP10A1A4S6 786 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 PDZK1P1A8MUH7 402 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 F5H423 210 aaPredicted RBP9.55□□□□□ -0.88
COL4A5-204ENST00000477429 HAX1O00165 279 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 AURKAO14965 403 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 TMEM63AO94886 807 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 SLC25A14O95258 325 aaPredicted RBP9.55□□□□□ -0.88
COL4A5-204ENST00000477429 SLC2A4P14672 509 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 ARSEP51690 589 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 CDH6P55285 790 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 UBE2HP62256 183 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 SLC25A11Q02978 314 aaKnown RBP9.55□□□□□ -0.88
COL4A5-204ENST00000477429 INSCQ1MX18 579 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 FAM198BQ6UWH4 519 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 SPOCD1Q6ZMY3 1216 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 TRIM48Q8IWZ4 208 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 TTC30BQ8N4P2 665 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 SIDT2Q8NBJ9 832 aaKnown RBP9.55□□□□□ -0.88
COL4A5-204ENST00000477429 NEK11Q8NG66 645 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 MR1Q95460 341 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 GLYATL1Q969I3 302 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 PNPLA2Q96AD5 504 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 TRIB3Q96RU7 358 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 SMAD5Q99717 465 aaKnown RBP9.55□□□□□ -0.88
COL4A5-204ENST00000477429 SPATA16Q9BXB7 569 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 GPR87Q9BY21 358 aa9.55□□□□□ -0.88
COL4A5-204ENST00000477429 POLR1EQ9GZS1 481 aaKnown RBP9.55□□□□□ -0.88
COL4A5-204ENST00000477429 TRIM39Q9HCM9 518 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms