RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 SEL1L2Q5TEA6 688 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 AGAP9Q5VTM2 703 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 ZFYVE26Q68DK2 2539 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 TMEM71Q6P5X7 295 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 TMEM220Q6QAJ8 160 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 SLC9B2Q86UD5 537 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 TAB3Q8N5C8 712 aaPredicted RBP15.3■□□□□ 0.04
COMMD6-209ENST00000477377 NAF1Q96HR8 494 aaKnown RBP15.3■□□□□ 0.04
COMMD6-209ENST00000477377 CCDC74BQ96LY2 380 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 PPP1R2P1Q96PQ5 205 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 SLC38A3Q99624 504 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 TBC1D10AQ9BXI6 508 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 FRMD8P1Q9BZ68 369 aaPredicted RBP15.3■□□□□ 0.04
COMMD6-209ENST00000477377 STRADBQ9C0K7 418 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 ASB8Q9H765 288 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 ETNK1Q9HBU6 452 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 FEZ2Q9UHY8 353 aaPredicted RBP15.3■□□□□ 0.04
COMMD6-209ENST00000477377 ACSL6Q9UKU0 697 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 PPP2R2CQ9Y2T4 447 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 SLC30A1Q9Y6M5 507 aa15.3■□□□□ 0.04
COMMD6-209ENST00000477377 MROH6A6NGR9 719 aa15.29■□□□□ 0.04
COMMD6-209ENST00000477377 OR5K4A6NMS3 321 aa15.29■□□□□ 0.04
COMMD6-209ENST00000477377 C9orf172C9J069 976 aa15.29■□□□□ 0.04
COMMD6-209ENST00000477377 H7C0S8 307 aa15.29■□□□□ 0.04
COMMD6-209ENST00000477377 RRP8O43159 456 aaKnown RBP15.29■□□□□ 0.04
COMMD6-209ENST00000477377 POP7O75817 140 aaKnown RBP15.29■□□□□ 0.04
COMMD6-209ENST00000477377 SUN1O94901 812 aa15.29■□□□□ 0.04
COMMD6-209ENST00000477377 CRTAMO95727 393 aa15.29■□□□□ 0.04
COMMD6-209ENST00000477377 PTMAP06454 111 aaKnown RBP15.29■□□□□ 0.04
COMMD6-209ENST00000477377 ZSCAN5DPP0CG00 497 aa15.29■□□□□ 0.04
COMMD6-209ENST00000477377 PRSS56P0CW18 603 aa15.29■□□□□ 0.04
COMMD6-209ENST00000477377 SLC5A2P31639 672 aa15.29■□□□□ 0.04
COMMD6-209ENST00000477377 DRG2P55039 364 aaKnown RBP15.29■□□□□ 0.04
COMMD6-209ENST00000477377 TMPRSS15P98073 1019 aa15.29■□□□□ 0.04
COMMD6-209ENST00000477377 KCTD19Q17RG1 926 aaPredicted RBP15.29■□□□□ 0.04
COMMD6-209ENST00000477377 INSCQ1MX18 579 aa15.29■□□□□ 0.04
COMMD6-209ENST00000477377 PHF19Q5T6S3 580 aa15.29■□□□□ 0.04
COMMD6-209ENST00000477377 DRICH1Q6PGQ1 229 aaPredicted RBP15.29■□□□□ 0.04
COMMD6-209ENST00000477377 BEND7Q8N7W2 519 aaPredicted RBP15.29■□□□□ 0.04
COMMD6-209ENST00000477377 GDAP1Q8TB36 358 aa15.29■□□□□ 0.04
COMMD6-209ENST00000477377 PMEPA1Q969W9 287 aa15.29■□□□□ 0.04
COMMD6-209ENST00000477377 TMEM159Q96B96 161 aa15.29■□□□□ 0.04
COMMD6-209ENST00000477377 SGF29Q96ES7 293 aa15.29■□□□□ 0.04
COMMD6-209ENST00000477377 DNAJC1Q96KC8 554 aaKnown RBP15.29■□□□□ 0.04
COMMD6-209ENST00000477377 OSGEPL1Q9H4B0 414 aa15.29■□□□□ 0.04
COMMD6-209ENST00000477377 FAM96AQ9H5X1 160 aa15.29■□□□□ 0.04
COMMD6-209ENST00000477377 LRRC40Q9H9A6 602 aa15.29■□□□□ 0.04
COMMD6-209ENST00000477377 UCK1Q9HA47 277 aa15.29■□□□□ 0.04
COMMD6-209ENST00000477377 GRPEL1Q9HAV7 217 aa15.29■□□□□ 0.04
COMMD6-209ENST00000477377 PISDQ9UG56 409 aa15.29■□□□□ 0.04
COMMD6-209ENST00000477377 DNMT3AQ9Y6K1 912 aaPredicted RBP15.29■□□□□ 0.04
COMMD6-209ENST00000477377 PTPRQQ9UMZ3 2332 aa15.29■□□□□ 0.04
COMMD6-209ENST00000477377 TRBV5-4A0A0C4DH59 114 aa15.28■□□□□ 0.04
COMMD6-209ENST00000477377 OR2AG2A6NM03 316 aa15.28■□□□□ 0.04
COMMD6-209ENST00000477377 OR52A4PA6NMU1 304 aa15.28■□□□□ 0.04
COMMD6-209ENST00000477377 HGSO14964 777 aaPredicted RBP15.28■□□□□ 0.04
COMMD6-209ENST00000477377 NVLO15381 856 aaKnown RBP15.28■□□□□ 0.04
COMMD6-209ENST00000477377 EFSO43281 561 aa15.28■□□□□ 0.04
COMMD6-209ENST00000477377 KCNJ13O60928 360 aa15.28■□□□□ 0.04
COMMD6-209ENST00000477377 FGF3P11487 239 aaPredicted RBP15.28■□□□□ 0.04
COMMD6-209ENST00000477377 EPHA4P54764 986 aa15.28■□□□□ 0.04
COMMD6-209ENST00000477377 CLN3Q13286 438 aa15.28■□□□□ 0.04
COMMD6-209ENST00000477377 TRA2AQ13595 282 aaKnown RBP eCLIP15.28■□□□□ 0.04
COMMD6-209ENST00000477377 SNX1Q13596 522 aa15.28■□□□□ 0.04
COMMD6-209ENST00000477377 SEPT7Q16181 437 aaKnown RBP15.28■□□□□ 0.04
COMMD6-209ENST00000477377 CCNG2Q16589 344 aa15.28■□□□□ 0.04
COMMD6-209ENST00000477377 ZNF658BQ4V348 819 aaPredicted RBP15.28■□□□□ 0.04
COMMD6-209ENST00000477377 WDR74Q6RFH5 385 aaPredicted RBP15.28■□□□□ 0.04
COMMD6-209ENST00000477377 LRRC69Q6ZNQ3 347 aa15.28■□□□□ 0.04
COMMD6-209ENST00000477377 TMEM26Q6ZUK4 368 aa15.28■□□□□ 0.04
COMMD6-209ENST00000477377 ARHGAP22Q7Z5H3 698 aa15.28■□□□□ 0.04
COMMD6-209ENST00000477377 TRAPPC5Q8IUR0 188 aa15.28■□□□□ 0.04
COMMD6-209ENST00000477377 OR52K1Q8NGK4 314 aa15.28■□□□□ 0.04
COMMD6-209ENST00000477377 CDKN2AIPNLQ96HQ2 116 aa15.28■□□□□ 0.04
COMMD6-209ENST00000477377 BBC3Q96PG8 261 aaPredicted RBP15.28■□□□□ 0.04
COMMD6-209ENST00000477377 CMKLR1Q99788 373 aa15.28■□□□□ 0.04
COMMD6-209ENST00000477377 SLC40A1Q9NP59 571 aa15.28■□□□□ 0.04
COMMD6-209ENST00000477377 NLE1Q9NVX2 485 aaPredicted RBP15.28■□□□□ 0.04
COMMD6-209ENST00000477377 FOXJ2Q9P0K8 574 aa15.28■□□□□ 0.04
COMMD6-209ENST00000477377 MGAQ8IWI9 3026 aa15.27■□□□□ 0.04
COMMD6-209ENST00000477377 IGLV3-16A0A075B6K0 115 aa15.27■□□□□ 0.04
COMMD6-209ENST00000477377 LILRA5A6NI73 299 aa15.27■□□□□ 0.04
COMMD6-209ENST00000477377 ZW10O43264 779 aa15.27■□□□□ 0.04
COMMD6-209ENST00000477377 PRAMEF10O60809 474 aa15.27■□□□□ 0.04
COMMD6-209ENST00000477377 SLC2A4P14672 509 aa15.27■□□□□ 0.04
COMMD6-209ENST00000477377 IDSP22304 550 aa15.27■□□□□ 0.04
COMMD6-209ENST00000477377 RPL22P35268 128 aaKnown RBP15.27■□□□□ 0.04
COMMD6-209ENST00000477377 SEMA5AQ13591 1074 aa15.27■□□□□ 0.04
COMMD6-209ENST00000477377 GTF2H3Q13889 308 aa15.27■□□□□ 0.04
COMMD6-209ENST00000477377 NFE2L1Q14494 772 aa15.27■□□□□ 0.04
COMMD6-209ENST00000477377 POU6F1Q14863 301 aa15.27■□□□□ 0.04
COMMD6-209ENST00000477377 BCL7AQ4VC05 210 aa15.27■□□□□ 0.04
COMMD6-209ENST00000477377 METRNLQ641Q3 311 aa15.27■□□□□ 0.04
COMMD6-209ENST00000477377 DET1Q7L5Y6 550 aa15.27■□□□□ 0.04
COMMD6-209ENST00000477377 SNX20Q7Z614 316 aa15.27■□□□□ 0.04
COMMD6-209ENST00000477377 AMZ2Q86W34 360 aa15.27■□□□□ 0.04
COMMD6-209ENST00000477377 REXO1L1PQ8IX06 675 aa15.27■□□□□ 0.04
COMMD6-209ENST00000477377 LILRA3Q8N6C8 439 aaPredicted RBP15.27■□□□□ 0.04
COMMD6-209ENST00000477377 BMPERQ8N8U9 685 aa15.27■□□□□ 0.04
COMMD6-209ENST00000477377 TRIM58Q8NG06 486 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms