RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 VAV2P52735 878 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 RAB15P59190 212 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 EIF3EP60228 445 aaKnown RBP10.62□□□□□ -0.71
SEC13-214ENST00000476597 MC2RQ01718 297 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 MSLNQ13421 630 aaPredicted RBP10.62□□□□□ -0.71
SEC13-214ENST00000476597 GTF2H3Q13889 308 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 LY6DQ14210 128 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 PLA2G4EQ3MJ16 856 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 ANKRD20A2Q5SQ80 823 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 SNAP47Q5SQN1 464 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 LDLRAP1Q5SW96 308 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 DCAF12Q5T6F0 453 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 ANKRD20A1Q5TYW2 823 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 ANKRD20A3Q5VUR7 823 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 ITPRIPL1Q6GPH6 555 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 AADACL2Q6P093 401 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 FAM151BQ6UXP7 276 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 TMEM26Q6ZUK4 368 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 VASH2Q86V25 355 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 PLXDC1Q8IUK5 500 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 CDKL3Q8IVW4 592 aaPredicted RBP10.62□□□□□ -0.71
SEC13-214ENST00000476597 ACRBPQ8NEB7 543 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 DDHD1Q8NEL9 900 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 ZNF398Q8TD17 642 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 ALG3Q92685 438 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 TTC25Q96NG3 672 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 FERMT1Q9BQL6 677 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 FSD1LQ9BXM9 530 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 SEMA4CQ9C0C4 833 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 SLC40A1Q9NP59 571 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 FBXO8Q9NRD0 319 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 OGFRQ9NZT2 677 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 AAR2Q9Y312 384 aaKnown RBP10.62□□□□□ -0.71
SEC13-214ENST00000476597 PKP3Q9Y446 797 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 SLC30A1Q9Y6M5 507 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 TENM4Q6N022 2769 aa10.62□□□□□ -0.71
SEC13-214ENST00000476597 FLNBO75369 2602 aaKnown RBP10.62□□□□□ -0.71
SEC13-214ENST00000476597 TLN1Q9Y490 2541 aaKnown RBP10.61□□□□□ -0.71
SEC13-214ENST00000476597 GRID2IPA4D2P6 1211 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 C5orf60A6NFR6 353 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 STX7O15400 261 aaKnown RBP10.61□□□□□ -0.71
SEC13-214ENST00000476597 KCNN4O15554 427 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 POP7O75817 140 aaKnown RBP10.61□□□□□ -0.71
SEC13-214ENST00000476597 UBXN7O94888 489 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 TJP3O95049 919 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 C9P02748 559 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 VCLP18206 1134 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 LPOP22079 712 aaPredicted RBP10.61□□□□□ -0.71
SEC13-214ENST00000476597 RPL10P27635 214 aaKnown RBP10.61□□□□□ -0.71
SEC13-214ENST00000476597 CETN2P41208 172 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 MAPK9P45984 424 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 CTSCP53634 463 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 DMPKQ09013 629 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 ITGA9Q13797 1035 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 PTPRCAPQ14761 206 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 CLCA4Q14CN2 919 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 TAF1AQ15573 450 aaPredicted RBP10.61□□□□□ -0.71
SEC13-214ENST00000476597 SEPT7Q16181 437 aaKnown RBP10.61□□□□□ -0.71
SEC13-214ENST00000476597 LINC00303Q3SY05 128 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 GPRC6AQ5T6X5 926 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 ANKS6Q68DC2 871 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 DARS2Q6PI48 645 aaKnown RBP10.61□□□□□ -0.71
SEC13-214ENST00000476597 TMEM220Q6QAJ8 160 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 XKR5Q6UX68 686 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 AMZ2Q86W34 360 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 FAM129CQ86XR2 697 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 TRAPPC5Q8IUR0 188 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 TMEM139Q8IV31 216 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 RBM12BQ8IXT5 1001 aaKnown RBP10.61□□□□□ -0.71
SEC13-214ENST00000476597 RASGEF1AQ8N9B8 481 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 JPH3Q8WXH2 748 aaPredicted RBP10.61□□□□□ -0.71
SEC13-214ENST00000476597 TEFMQ96QE5 360 aaKnown RBP10.61□□□□□ -0.71
SEC13-214ENST00000476597 BAG1Q99933 345 aaPredicted RBP10.61□□□□□ -0.71
SEC13-214ENST00000476597 ZPBPQ9BS86 351 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 FICDQ9BVA6 458 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 ZMYND15Q9H091 742 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 POT1Q9NUX5 634 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 SMOXQ9NWM0 555 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 WDR37Q9Y2I8 494 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 ARL5AQ9Y689 179 aa10.61□□□□□ -0.71
SEC13-214ENST00000476597 OR52A4PA6NMU1 304 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 C2orf81A6NN90 581 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 AGAP14A8MT82 685 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 TOX3O15405 576 aaPredicted RBP10.6□□□□□ -0.71
SEC13-214ENST00000476597 GPR39O43194 453 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 STK10O94804 968 aaKnown RBP10.6□□□□□ -0.71
SEC13-214ENST00000476597 ITGB2P05107 769 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 ANKRD34CP0C6C1 535 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 TYRP1P17643 537 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 PSMB4P28070 264 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 ATP1A2P50993 1020 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 DRG2P55039 364 aaKnown RBP10.6□□□□□ -0.71
SEC13-214ENST00000476597 GFERP55789 205 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 XIAPP98170 497 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 OLIG2Q13516 323 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 PRPSAP1Q14558 356 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 DENND5AQ6IQ26 1287 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 CEACAM20Q6UY09 585 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 PEX26Q7Z412 305 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 ZNF605Q86T29 641 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms