RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 CCL4P13236 92 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 GDF10P55107 478 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 PDE1BQ01064 536 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 OLIG2Q13516 323 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 PLA2G4EQ3MJ16 856 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 MANEAQ5SRI9 462 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 NKAIN2Q5VXU1 208 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 TMEM71Q6P5X7 295 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 XKR5Q6UX68 686 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 ZFAND4Q86XD8 727 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 AVL9Q8NBF6 648 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 RCBTB1Q8NDN9 531 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 OR10G6Q8NH81 332 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 DTX3LQ8TDB6 740 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 SH3KBP1Q96B97 665 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 MED8Q96G25 268 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 TTC25Q96NG3 672 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 TAAR9Q96RI9 348 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 SLC38A3Q99624 504 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 ZMYND15Q9H091 742 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 OSGEPL1Q9H4B0 414 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 LRRC40Q9H9A6 602 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 PDP2Q9P2J9 529 aa15.96■□□□□ 0.15
COL1A1-205ENST00000476387 KIR2DS5A0A0G2JLQ3 304 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 A0A0G2JNG1 304 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 A6NCN8 305 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 STMND1H3BQB6 276 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 KIR2DS3K7RE56 304 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 AGRPO00253 132 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 PSMD3O43242 534 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 LIASO43766 372 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 DUX1O43812 170 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 SNX2O60749 519 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 PRAMEF1O95521 474 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 EML2O95834 649 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 ITGB2P05107 769 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 FGF3P11487 239 aaPredicted RBP15.95■□□□□ 0.14
COL1A1-205ENST00000476387 PLA2G2AP14555 144 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 CSTF2P33240 577 aaKnown RBP eCLIP15.95■□□□□ 0.14
COL1A1-205ENST00000476387 PPM1FP49593 454 aaPredicted RBP15.95■□□□□ 0.14
COL1A1-205ENST00000476387 CLCNKAP51800 687 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 HHEXQ03014 270 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 LY6DQ14210 128 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 SPARCL1Q14515 664 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 KIR2DS5Q14953 304 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 CHRNA6Q15825 494 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 LDLRAP1Q5SW96 308 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 IYDQ6PHW0 289 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 WDR74Q6RFH5 385 aaPredicted RBP15.95■□□□□ 0.14
COL1A1-205ENST00000476387 SLC9B2Q86UD5 537 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 TRAPPC5Q8IUR0 188 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 OR4K2Q8NGD2 314 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 BRSK1Q8TDC3 778 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 AHCYL2Q96HN2 611 aaKnown RBP15.95■□□□□ 0.14
COL1A1-205ENST00000476387 DDA1Q9BW61 102 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 SEMA4CQ9C0C4 833 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 KLC4Q9NSK0 619 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 WDR70Q9NW82 654 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 TBC1D29Q9UFV1 150 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 ZNF148Q9UQR1 794 aa15.95■□□□□ 0.14
COL1A1-205ENST00000476387 OR5K4A6NMS3 321 aa15.94■□□□□ 0.14
COL1A1-205ENST00000476387 B4E171 279 aa15.94■□□□□ 0.14
COL1A1-205ENST00000476387 CHUKO15111 745 aa15.94■□□□□ 0.14
COL1A1-205ENST00000476387 METTL18O95568 372 aa15.94■□□□□ 0.14
COL1A1-205ENST00000476387 IFNB1P01574 187 aa15.94■□□□□ 0.14
COL1A1-205ENST00000476387 F3P13726 295 aa15.94■□□□□ 0.14
COL1A1-205ENST00000476387 VCLP18206 1134 aa15.94■□□□□ 0.14
COL1A1-205ENST00000476387 AKT1P31749 480 aa15.94■□□□□ 0.14
COL1A1-205ENST00000476387 STIP1P31948 543 aaKnown RBP15.94■□□□□ 0.14
COL1A1-205ENST00000476387 TSPAN7P41732 249 aa15.94■□□□□ 0.14
COL1A1-205ENST00000476387 EPHA4P54764 986 aa15.94■□□□□ 0.14
COL1A1-205ENST00000476387 TMEM115Q12893 351 aaPredicted RBP15.94■□□□□ 0.14
COL1A1-205ENST00000476387 OASLQ15646 514 aaKnown RBP15.94■□□□□ 0.14
COL1A1-205ENST00000476387 KLHDC8BQ8IXV7 354 aa15.94■□□□□ 0.14
COL1A1-205ENST00000476387 TAB3Q8N5C8 712 aaPredicted RBP15.94■□□□□ 0.14
COL1A1-205ENST00000476387 ZSCAN1Q8NBB4 408 aa15.94■□□□□ 0.14
COL1A1-205ENST00000476387 MAIP1Q8WWC4 291 aa15.94■□□□□ 0.14
COL1A1-205ENST00000476387 C1orf54Q8WWF1 131 aa15.94■□□□□ 0.14
COL1A1-205ENST00000476387 RTP4Q96DX8 246 aa15.94■□□□□ 0.14
COL1A1-205ENST00000476387 TIMM29Q9BSF4 260 aa15.94■□□□□ 0.14
COL1A1-205ENST00000476387 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.94■□□□□ 0.14
COL1A1-205ENST00000476387 ASPSCR1Q9BZE9 553 aa15.94■□□□□ 0.14
COL1A1-205ENST00000476387 EPB41L1Q9H4G0 881 aa15.94■□□□□ 0.14
COL1A1-205ENST00000476387 ARNT2Q9HBZ2 717 aa15.94■□□□□ 0.14
COL1A1-205ENST00000476387 TMPRSS11EQ9UL52 423 aa15.94■□□□□ 0.14
COL1A1-205ENST00000476387 PCDHGA4Q9Y5G9 962 aa15.94■□□□□ 0.14
COL1A1-205ENST00000476387 SDK2Q58EX2 2172 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 FLNBO75369 2602 aaKnown RBP15.93■□□□□ 0.14
COL1A1-205ENST00000476387 TLN1Q9Y490 2541 aaKnown RBP15.93■□□□□ 0.14
COL1A1-205ENST00000476387 TRBV23OR9-2A0A075B6M9 112 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 GPR39O43194 453 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 UGT1A9O60656 530 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 AP2A1O95782 977 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 ZNF7P17097 686 aaPredicted RBP15.93■□□□□ 0.14
COL1A1-205ENST00000476387 UGT1A6P19224 532 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 UGT1A1P22309 533 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 UGT1A4P22310 534 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 UGT1A3P35503 534 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 HADHAP40939 763 aa15.93■□□□□ 0.14
COL1A1-205ENST00000476387 LMAN1P49257 510 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms