RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 CCDC190Q86UF4 302 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 IGFN1Q86VF2 1251 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 FAM219AQ8IW50 185 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 ADGRF4Q8IZF3 695 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 MRPL43Q8N983 215 aaKnown RBP4.16□□□□□ -1.74
VPS13D-207ENST00000476169 CNNM3Q8NE01 707 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 OR4N2Q8NGD1 307 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 CEP76Q8TAP6 659 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 OSR1Q8TAX0 266 aaPredicted RBP4.16□□□□□ -1.74
VPS13D-207ENST00000476169 URGCPQ8TCY9 931 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 ZNF398Q8TD17 642 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 HDAC7Q8WUI4 952 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 ST6GALNAC6Q969X2 333 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 ARSGQ96EG1 525 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 ZNF419Q96HQ0 510 aaPredicted RBP4.16□□□□□ -1.74
VPS13D-207ENST00000476169 SLITRK1Q96PX8 696 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 HSD3B7Q9H2F3 369 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 FZD8Q9H461 694 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 MOV10Q9HCE1 1003 aaKnown RBP4.16□□□□□ -1.74
VPS13D-207ENST00000476169 SYTL2Q9HCH5 934 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 ZNF304Q9HCX3 659 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 GPR108Q9NPR9 543 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 COMMD8Q9NX08 183 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 TMEM161AQ9NX61 479 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 MTMR10Q9NXD2 777 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 CYP39A1Q9NYL5 469 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 STK26Q9P289 416 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 ZNF624Q9P2J8 865 aaPredicted RBP4.16□□□□□ -1.74
VPS13D-207ENST00000476169 POLLQ9UGP5 575 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 GMEB2Q9UKD1 530 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 MTUS1Q9ULD2 1270 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 A3GALT2U3KPV4 340 aa4.16□□□□□ -1.74
VPS13D-207ENST00000476169 A0A087X1B8 175 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 SLC30A4O14863 429 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 NEURL1O76050 574 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 ICAM1P05362 532 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 LCKP06239 509 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 WNT5AP41221 380 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 PSMC4P43686 418 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 GPR12P47775 334 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 IFNAR2P48551 515 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 NAGLUP54802 743 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 ADARP55265 1226 aaKnown RBP4.15□□□□□ -1.75
VPS13D-207ENST00000476169 PMPCAQ10713 525 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 SREBF2Q12772 1141 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 ZNF268Q14587 947 aaPredicted RBP4.15□□□□□ -1.75
VPS13D-207ENST00000476169 TMEM119Q4V9L6 283 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 RNASEH2BQ5TBB1 312 aaKnown RBP4.15□□□□□ -1.75
VPS13D-207ENST00000476169 C12orf60Q5U649 245 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 CRIP3Q6Q6R5 217 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 MFSD7Q6UXD7 560 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 TMEM182Q6ZP80 229 aaPredicted RBP4.15□□□□□ -1.75
VPS13D-207ENST00000476169 RGS9BPQ6ZS82 235 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 DPPA4Q7L190 304 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 TLK2Q86UE8 772 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 TSPAN33Q86UF1 283 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 TRIM74Q86UV6 250 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 TRIM73Q86UV7 250 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 CCDC83Q8IWF9 413 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 C4orf19Q8IY42 314 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 ZNF595Q8IYB9 648 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 BEST2Q8NFU1 509 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 CMASQ8NFW8 434 aaPredicted RBP4.15□□□□□ -1.75
VPS13D-207ENST00000476169 NCOA7Q8NI08 942 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 TRPC4APQ8TEL6 797 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 ZNF606Q8WXB4 792 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 MAP4K1Q92918 833 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 C5orf30Q96GV9 206 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 SLC41A2Q96JW4 573 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 EGLN2Q96KS0 407 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 SPATA13Q96N96 652 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 MS4A10Q96PG2 267 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 ACOX2Q99424 681 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 FAM110AQ9BQ89 295 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 OSBPL8Q9BZF1 889 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 POLE3Q9NRF9 147 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 ARPP21Q9UBL0 812 aaPredicted RBP4.15□□□□□ -1.75
VPS13D-207ENST00000476169 PLEKHB1Q9UF11 243 aaPredicted RBP4.15□□□□□ -1.75
VPS13D-207ENST00000476169 NDRG3Q9UGV2 375 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 DBNLQ9UJU6 430 aaKnown RBP4.15□□□□□ -1.75
VPS13D-207ENST00000476169 STRAPQ9Y3F4 350 aaKnown RBP4.15□□□□□ -1.75
VPS13D-207ENST00000476169 KIF3AQ9Y496 699 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 ANGPTL3Q9Y5C1 460 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 CLCA3PQ9Y6N3 262 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 NCAPD3P42695 1498 aa4.15□□□□□ -1.75
VPS13D-207ENST00000476169 MROH2BQ7Z745 1585 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 MST1RQ04912 1400 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 A0A0A6YYC8 382 aaPredicted RBP4.14□□□□□ -1.75
VPS13D-207ENST00000476169 KANSL1LA0AUZ9 987 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 SLC9B1P1A6NJY1 282 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 C2CD4BA6NLJ0 364 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 TRIM77I1YAP6 450 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 I3L1I5 382 aaPredicted RBP4.14□□□□□ -1.75
VPS13D-207ENST00000476169 RHODO00212 210 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 MCF2LO15068 1137 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 SMAD9O15198 467 aaKnown RBP4.14□□□□□ -1.75
VPS13D-207ENST00000476169 TTI1O43156 1089 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 RAMP2O60895 175 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 HSF2BPO75031 334 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 RGS11O94810 467 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms