RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 SEL1L3Q68CR1 1132 aa19.54■□□□□ 0.72
SSR1-204ENST00000474597 FRMD7Q6ZUT3 714 aa19.54■□□□□ 0.72
SSR1-204ENST00000474597 CYP2U1Q7Z449 544 aa19.54■□□□□ 0.72
SSR1-204ENST00000474597 LSMEM2Q8N112 164 aa19.54■□□□□ 0.72
SSR1-204ENST00000474597 AFAP1L2Q8N4X5 818 aa19.54■□□□□ 0.72
SSR1-204ENST00000474597 BTN2A2Q8WVV5 523 aa19.54■□□□□ 0.72
SSR1-204ENST00000474597 SKA1Q96BD8 255 aa19.54■□□□□ 0.72
SSR1-204ENST00000474597 NUS1Q96E22 293 aa19.54■□□□□ 0.72
SSR1-204ENST00000474597 TRMOQ9BU70 441 aa19.54■□□□□ 0.72
SSR1-204ENST00000474597 HAO1Q9UJM8 370 aa19.54■□□□□ 0.72
SSR1-204ENST00000474597 APOBEC2Q9Y235 224 aaKnown RBP19.54■□□□□ 0.72
SSR1-204ENST00000474597 CKAP5Q14008 2032 aa19.54■□□□□ 0.72
SSR1-204ENST00000474597 FADS2P1A8MWK0 482 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 SNX2O60749 519 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 CCDC22O60826 627 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 DIAPH2O60879 1101 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 MTX2O75431 263 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 ADH1BP00325 375 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 C6P13671 934 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 KIR2DL1P43626 348 aaPredicted RBP19.53■□□□□ 0.72
SSR1-204ENST00000474597 CORO7P57737 925 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 BNIP1Q12981 228 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 CAMK2GQ13555 558 aaPredicted RBP19.53■□□□□ 0.72
SSR1-204ENST00000474597 CST6Q15828 149 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 SPRED3Q2MJR0 410 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 TMEM52BQ4KMG9 183 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 ADAMTSL2Q86TH1 951 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 ALYREFQ86V81 257 aaKnown RBP19.53■□□□□ 0.72
SSR1-204ENST00000474597 DDHD1Q8NEL9 900 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 VPS35Q96QK1 796 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 EBF4Q9BQW3 602 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 RSPH9Q9H1X1 276 aaPredicted RBP19.53■□□□□ 0.72
SSR1-204ENST00000474597 COG4Q9H9E3 785 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 LATS2Q9NRM7 1088 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 CD274Q9NZQ7 290 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 VTI1BQ9UEU0 232 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 ZDHHC2Q9UIJ5 367 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 ANKRD12Q6UB98 2062 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 ATG2BQ96BY7 2078 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 NCF1BA6NI72 391 aaPredicted RBP19.53■□□□□ 0.72
SSR1-204ENST00000474597 NCF1CA8MVU1 366 aaPredicted RBP19.53■□□□□ 0.72
SSR1-204ENST00000474597 MID1O15344 667 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 MMP20O60882 483 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 RECQL5O94762 991 aaPredicted RBP19.53■□□□□ 0.72
SSR1-204ENST00000474597 CBSLP0DN79 551 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 NCF1P14598 390 aaPredicted RBP19.53■□□□□ 0.72
SSR1-204ENST00000474597 CBSP35520 551 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 SCTRP47872 440 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 SATB1Q01826 763 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 CNTN1Q12860 1018 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 HSF5Q4G112 596 aaPredicted RBP19.53■□□□□ 0.72
SSR1-204ENST00000474597 SH2D4BQ5SQS7 431 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 TXNDC11Q6PKC3 985 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 CLNKQ7Z7G1 428 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 RALGPS2Q86X27 583 aaPredicted RBP19.53■□□□□ 0.72
SSR1-204ENST00000474597 CACUL1Q86Y37 369 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 KIRREL3Q8IZU9 778 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 GLYATL1Q969I3 302 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 KLHL42Q9P2K6 505 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 SLC12A4Q9UP95 1085 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 PIAS3Q9Y6X2 628 aa19.53■□□□□ 0.72
SSR1-204ENST00000474597 SZT2Q5T011 3432 aa19.52■□□□□ 0.72
SSR1-204ENST00000474597 BRWD1Q9NSI6 2320 aa19.52■□□□□ 0.72
SSR1-204ENST00000474597 QSOX1O00391 747 aa19.52■□□□□ 0.72
SSR1-204ENST00000474597 HDAC3O15379 428 aa19.52■□□□□ 0.72
SSR1-204ENST00000474597 AP2A2O94973 939 aa19.52■□□□□ 0.72
SSR1-204ENST00000474597 S100BP04271 92 aaPredicted RBP19.52■□□□□ 0.72
SSR1-204ENST00000474597 GM2AP17900 193 aa19.52■□□□□ 0.72
SSR1-204ENST00000474597 NTSR1P30989 418 aa19.52■□□□□ 0.72
SSR1-204ENST00000474597 IDH3AP50213 366 aa19.52■□□□□ 0.72
SSR1-204ENST00000474597 GALNT1Q10472 559 aaPredicted RBP19.52■□□□□ 0.72
SSR1-204ENST00000474597 SMAD4Q13485 552 aaKnown RBP19.52■□□□□ 0.72
SSR1-204ENST00000474597 STARD3Q14849 445 aa19.52■□□□□ 0.72
SSR1-204ENST00000474597 PON2Q15165 354 aa19.52■□□□□ 0.72
SSR1-204ENST00000474597 SKIV2LQ15477 1246 aaKnown RBP19.52■□□□□ 0.72
SSR1-204ENST00000474597 UNC50Q53HI1 259 aa19.52■□□□□ 0.72
SSR1-204ENST00000474597 C2orf27AQ580R0 203 aa19.52■□□□□ 0.72
SSR1-204ENST00000474597 ACSBG2Q5FVE4 666 aa19.52■□□□□ 0.72
SSR1-204ENST00000474597 MAVSQ7Z434 540 aa19.52■□□□□ 0.72
SSR1-204ENST00000474597 PHYKPLQ8IUZ5 450 aa19.52■□□□□ 0.72
SSR1-204ENST00000474597 PLCD3Q8N3E9 789 aa19.52■□□□□ 0.72
SSR1-204ENST00000474597 ASB2Q96Q27 587 aa19.52■□□□□ 0.72
SSR1-204ENST00000474597 FAM126AQ9BYI3 521 aaPredicted RBP19.52■□□□□ 0.72
SSR1-204ENST00000474597 GSTO2Q9H4Y5 243 aa19.52■□□□□ 0.72
SSR1-204ENST00000474597 C8orf33Q9H7E9 229 aaPredicted RBP19.52■□□□□ 0.72
SSR1-204ENST00000474597 TRPV5Q9NQA5 729 aa19.52■□□□□ 0.72
SSR1-204ENST00000474597 LIMD1Q9UGP4 676 aa19.52■□□□□ 0.72
SSR1-204ENST00000474597 MATN2O00339 956 aa19.51■□□□□ 0.71
SSR1-204ENST00000474597 FCHO1O14526 889 aa19.51■□□□□ 0.71
SSR1-204ENST00000474597 FTH1P02794 183 aa19.51■□□□□ 0.71
SSR1-204ENST00000474597 C5AR1P21730 350 aa19.51■□□□□ 0.71
SSR1-204ENST00000474597 EEF1DP29692 281 aaKnown RBP19.51■□□□□ 0.71
SSR1-204ENST00000474597 SPDYAQ5MJ70 313 aa19.51■□□□□ 0.71
SSR1-204ENST00000474597 ZNF776Q68DI1 518 aaPredicted RBP19.51■□□□□ 0.71
SSR1-204ENST00000474597 RPS27LQ71UM5 84 aaKnown RBP19.51■□□□□ 0.71
SSR1-204ENST00000474597 ZNF765Q7L2R6 523 aa19.51■□□□□ 0.71
SSR1-204ENST00000474597 CUZD1Q86UP6 607 aa19.51■□□□□ 0.71
SSR1-204ENST00000474597 KCNK12Q9HB15 430 aa19.51■□□□□ 0.71
SSR1-204ENST00000474597 HEBP1Q9NRV9 189 aa19.51■□□□□ 0.71
SSR1-204ENST00000474597 TXLNGQ9NUQ3 528 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms