RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 PLLPQ9Y342 182 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 MAB21L2Q9Y586 359 aa6.04□□□□□ -1.44
SMARCE1-208ENST00000474246 PTPRCP08575 1304 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 MYO9AB2RTY4 2548 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 EFCAB10A6NFE3 127 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 C12orf71A8MTZ7 269 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 WDR64B1ANS9 1081 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 PODXLO00592 558 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 TSPAN4O14817 238 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 JRKO75564 520 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 RECQL5O94762 991 aaPredicted RBP6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 SUN1O94901 812 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 CH25HO95992 272 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 SERPINA3P01011 423 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 KRT16P08779 473 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 GSTM1P09488 218 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 IL1R1P14778 569 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 ITGB6P18564 788 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 NFKB1P19838 968 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 ITGAXP20702 1163 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 AOAHP28039 575 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 CTGFP29279 349 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 RORAP35398 523 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 GRK3P35626 688 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 GSTM5P46439 218 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 CEBPDP49716 269 aaPredicted RBP6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 ZXDAP98168 799 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 ATP2C1P98194 919 aaPredicted RBP6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 AMPD2Q01433 879 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 FPGSQ05932 587 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 SIGLEC14Q08ET2 396 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 MERTKQ12866 999 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 SLAQ13239 276 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 GPR176Q14439 515 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 LAPTM4AQ15012 233 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 HKDC1Q2TB90 917 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 FASTKD1Q53R41 847 aaKnown RBP6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 FAM171A1Q5VUB5 890 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 C3orf33Q6P1S2 294 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 COLCA1Q6ZS62 124 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 FRA10AC1Q70Z53 315 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 ZNF438Q7Z4V0 828 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 ZNF573Q86YE8 665 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 CCDC103Q8IW40 242 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 EXOC6Q8TAG9 804 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 TGFBRAP1Q8WUH2 860 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 ING5Q8WYH8 240 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 LARP4BQ92615 738 aaKnown RBP6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 DACT3Q96B18 629 aaPredicted RBP6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 OTUB2Q96DC9 234 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 APOPT1Q96IL0 206 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 SLC41A2Q96JW4 573 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 ZNF514Q96K75 400 aaPredicted RBP6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 HHIPQ96QV1 700 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 CCNL2Q96S94 520 aaPredicted RBP6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 PSD2Q9BQI7 771 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 REEP2Q9BRK0 252 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 CNPY3Q9BT09 278 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 SPATA16Q9BXB7 569 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 GPAMQ9HCL2 828 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 PEF1Q9UBV8 284 aaKnown RBP6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 B4GALT6Q9UBX8 382 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 CDH9Q9ULB4 789 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 MAN2B2Q9Y2E5 1009 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 TDRKHQ9Y2W6 561 aaKnown RBP6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 NUMBLQ9Y6R0 609 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 ASTN2O75129 1339 aaPredicted RBP6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 C2CD3Q4AC94 2353 aa6.03□□□□□ -1.44
SMARCE1-208ENST00000474246 TMEM114B3SHH9 223 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 GRM8O00222 908 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 TOM1L1O75674 476 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 ITGA2BP08514 1039 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 SFNP31947 248 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 PAFAH1B1P43034 410 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 FLT3LGP49771 235 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 ARFIP2P53365 341 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 ANTXR2P58335 489 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 FMO1Q01740 532 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 RHAGQ02094 409 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 CYP24A1Q07973 514 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 USF2Q15853 346 aaPredicted RBP6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 NTRK2Q16620 822 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 P3H1Q32P28 736 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 MOGAT2Q3SYC2 334 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 C6orf183Q5T699 404 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 ZDHHC20Q5W0Z9 365 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 SLFN13Q68D06 897 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 PMF1Q6P1K2 205 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 IL20RBQ6UXL0 311 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 IDO2Q6ZQW0 420 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 ERN2Q76MJ5 926 aaKnown RBP6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 SYVN1Q86TM6 617 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 RTN4RL1Q86UN2 441 aaPredicted RBP6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 TAC4Q86UU9 113 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 ZSWIM9Q86XI8 627 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 PLCZ1Q86YW0 608 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 TICAM1Q8IUC6 712 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 MISPQ8IVT2 679 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 OFCC1Q8IZS5 231 aa6.02□□□□□ -1.45
SMARCE1-208ENST00000474246 KDM1BQ8NB78 822 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms