RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 L2HGDHQ9H9P8 463 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 FANCEQ9HB96 536 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 APOBEC3GQ9HC16 384 aaKnown RBP6.39□□□□□ -1.39
HDAC3-206ENST00000471968 OLFML3Q9NRN5 406 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 TFIP11Q9UBB9 837 aaKnown RBP6.39□□□□□ -1.39
HDAC3-206ENST00000471968 EPHA6Q9UF33 1036 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 SPTBP11277 2137 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 UBA6A0AVT1 1052 aaPredicted RBP6.38□□□□□ -1.39
HDAC3-206ENST00000471968 CFAP69A5D8W1 941 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 SLC9B1P1A6NJY1 282 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 OR5K4A6NMS3 321 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 C3orf80F5H4A9 247 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 INSIG1O15503 277 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 MATN4O95460 622 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 CBSLP0DN79 551 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 MYBL2P10244 700 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 MMP11P24347 488 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 CCR1P32246 355 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 CBSP35520 551 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 UBA7P41226 1012 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 TOB1P50616 345 aaPredicted RBP6.38□□□□□ -1.39
HDAC3-206ENST00000471968 RAD23BP54727 409 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 CAPRIN1Q14444 709 aaKnown RBP6.38□□□□□ -1.39
HDAC3-206ENST00000471968 TUBB8Q3ZCM7 444 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 ZNF766Q5HY98 468 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 TMTC4Q5T4D3 741 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 CFAP58Q5T655 872 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 C1orf189Q5VU69 101 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 ZNF385CQ66K41 422 aaPredicted RBP6.38□□□□□ -1.39
HDAC3-206ENST00000471968 RAET1GQ6H3X3 334 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 PMF1Q6P1K2 205 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 KIRREL2Q6UWL6 708 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 WDR53Q7Z5U6 358 aaPredicted RBP6.38□□□□□ -1.39
HDAC3-206ENST00000471968 TRIM74Q86UV6 250 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 SIAH3Q8IW03 269 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 LZTR1Q8N653 840 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 SIRT6Q8N6T7 355 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 XXYLT1Q8NBI6 393 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 NETO2Q8NC67 525 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 OR1L3Q8NH93 324 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 FAM57AQ8TBR7 257 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 TEKT4Q8WW24 435 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 GDAP1L1Q96MZ0 367 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 CCL19Q99731 98 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 NCAPGQ9BPX3 1015 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 YIPF4Q9BSR8 244 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 TLR10Q9BXR5 811 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 TRIM7Q9C029 511 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 NIF3L1Q9GZT8 377 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 C12orf65Q9H3J6 166 aaKnown RBP6.38□□□□□ -1.39
HDAC3-206ENST00000471968 FAM204AQ9H8W3 233 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 SOHLH2Q9NX45 425 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 MPP6Q9NZW5 540 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 IFT80Q9P2H3 777 aaPredicted RBP6.38□□□□□ -1.39
HDAC3-206ENST00000471968 CDYLQ9Y232 598 aa6.38□□□□□ -1.39
HDAC3-206ENST00000471968 PCYT1BQ9Y5K3 369 aaPredicted RBP6.38□□□□□ -1.39
HDAC3-206ENST00000471968 TENM3Q9P273 2699 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 ILVBLA1L0T0 632 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 GRID2IPA4D2P6 1211 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 OR5H15A6NDH6 313 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 USP27XA6NNY8 438 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 TMEM150CB9EJG8 249 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 TTI1O43156 1089 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 PFKFB2O60825 505 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 IGLV3-25P01717 112 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 HLA-DRAP01903 254 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 HRGP04196 525 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 SETSIPP0DME0 302 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 SLC2A3P11169 496 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 EPXP11678 715 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 ACP5P13686 325 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 PTGS2P35354 604 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 SOX11P35716 441 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 ETFBP38117 255 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 CEBPZQ03701 1054 aaKnown RBP6.37□□□□□ -1.39
HDAC3-206ENST00000471968 ADCY2Q08462 1091 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 HYAL4Q2M3T9 481 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 C5orf22Q49AR2 442 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 ZNF789Q5FWF6 425 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 DNTTIP2Q5QJE6 756 aaKnown RBP6.37□□□□□ -1.39
HDAC3-206ENST00000471968 HIBCHQ6NVY1 386 aaPredicted RBP6.37□□□□□ -1.39
HDAC3-206ENST00000471968 ACAD11Q709F0 780 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 ZSWIM9Q86XI8 627 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 LIX1LQ8IVB5 337 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 FAM20CQ8IXL6 584 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 LGI4Q8N135 537 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 CCDC110Q8TBZ0 833 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 BRIX1Q8TDN6 353 aaKnown RBP6.37□□□□□ -1.39
HDAC3-206ENST00000471968 ZBED6CLQ96FA7 236 aaPredicted RBP6.37□□□□□ -1.39
HDAC3-206ENST00000471968 IMPG2Q9BZV3 1241 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 SLC6A16Q9GZN6 736 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 RAB33BQ9H082 229 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 SHARPINQ9H0F6 387 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 FOXP1Q9H334 677 aaPredicted RBP6.37□□□□□ -1.39
HDAC3-206ENST00000471968 AGPAT3Q9NRZ7 376 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 SCHIP1Q9P0W5 487 aaPredicted RBP6.37□□□□□ -1.39
HDAC3-206ENST00000471968 LPAR3Q9UBY5 353 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 HS3ST3B1Q9Y662 390 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 CCDC88CQ9P219 2028 aa6.37□□□□□ -1.39
HDAC3-206ENST00000471968 LOC100653049A0A140TA62 436 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms