RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 PRPSAP2O60256 369 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 TRBC1P01850 177 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 CYP1A1P04798 512 aaPredicted RBP6.73□□□□□ -1.33
HDAC1-204ENST00000471488 UQCRHP07919 91 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 UCHL3P15374 230 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 ZNF30P17039 623 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 ZNF7P17097 686 aaPredicted RBP6.73□□□□□ -1.33
HDAC1-204ENST00000471488 CHRNB2P17787 502 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 VCLP18206 1134 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 AGXTP21549 392 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 CDH3P22223 829 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 AMPD1P23109 780 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 HTR1EP28566 365 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 HSPA9P38646 679 aaKnown RBP6.73□□□□□ -1.33
HDAC1-204ENST00000471488 STC1P52823 247 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 AIF1P55008 147 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 KCNK10P57789 538 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 POLR2FP61218 127 aaKnown RBP6.73□□□□□ -1.33
HDAC1-204ENST00000471488 TUBB4BP68371 445 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 DSC2Q02487 901 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 TUBB2AQ13885 445 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 GTF2H3Q13889 308 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 KRT33BQ14525 404 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 CAMK4Q16566 473 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 CYP2A13Q16696 494 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 ERMARDQ5T6L9 678 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 C1orf189Q5VU69 101 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 IRAK1BP1Q5VVH5 260 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 KLHL35Q6PF15 583 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 FAM180AQ6UWF9 173 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 TMCO3Q6UWJ1 677 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 TRIM72Q6ZMU5 477 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 ZNF765Q7L2R6 523 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 KCNMB4Q86W47 210 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 ZNF677Q86XU0 584 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 SYTL1Q8IYJ3 562 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 CBARPQ8N350 705 aaPredicted RBP6.73□□□□□ -1.33
HDAC1-204ENST00000471488 AOPEPQ8N6M6 819 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 C3orf20Q8ND61 904 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 DNAJB14Q8TBM8 379 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 ADAMTS17Q8TE56 1095 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 PIH1D2Q8WWB5 315 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 HSPH1Q92598 858 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 INPP5DQ92835 1189 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 POM121Q96HA1 1249 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 FER1L6-AS2Q96M78 137 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 TIGD1Q96MW7 591 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 TTC25Q96NG3 672 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 MCCC1Q96RQ3 725 aaPredicted RBP6.73□□□□□ -1.33
HDAC1-204ENST00000471488 PCDHB18PQ96TA0 734 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 MGME1Q9BQP7 344 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 TUBB2BQ9BVA1 445 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 NLNQ9BYT8 704 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 KLHL25Q9H0H3 589 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 CARD9Q9H257 536 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 DEF6Q9H4E7 631 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 ZWILCHQ9H900 591 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 ACTR5Q9H9F9 607 aaPredicted RBP6.73□□□□□ -1.33
HDAC1-204ENST00000471488 UCK1Q9HA47 277 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 SLC40A1Q9NP59 571 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 SAMSN1Q9NSI8 373 aaKnown RBP6.73□□□□□ -1.33
HDAC1-204ENST00000471488 POT1Q9NUX5 634 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 IMP3Q9NV31 184 aaKnown RBP6.73□□□□□ -1.33
HDAC1-204ENST00000471488 HRASLS2Q9NWW9 162 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 IRAK4Q9NWZ3 460 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 DTLQ9NZJ0 730 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 C5AR2Q9P296 337 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 NOCTQ9UK39 431 aaKnown RBP6.73□□□□□ -1.33
HDAC1-204ENST00000471488 CNOT6Q9ULM6 557 aaKnown RBP6.73□□□□□ -1.33
HDAC1-204ENST00000471488 PADI2Q9Y2J8 665 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 PTRH2Q9Y3E5 179 aaKnown RBP6.73□□□□□ -1.33
HDAC1-204ENST00000471488 PCDHGA10Q9Y5H3 936 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 CSAG2Q9Y5P2 127 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 CFAP20Q9Y6A4 193 aaKnown RBP6.73□□□□□ -1.33
HDAC1-204ENST00000471488 CSMD2Q7Z408 3487 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 DIDO1Q9BTC0 2240 aaKnown RBP6.72□□□□□ -1.33
HDAC1-204ENST00000471488 GSAPA4D1B5 854 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 OR6C74A6NCV1 312 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 H3BRJ5 948 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 ATMINO43313 823 aaPredicted RBP6.72□□□□□ -1.33
HDAC1-204ENST00000471488 MAP3K7O43318 606 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 RNF8O76064 485 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 IPO13O94829 963 aaKnown RBP6.72□□□□□ -1.33
HDAC1-204ENST00000471488 CDK14O94921 469 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 RAB40ALP0C0E4 278 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 PIRTP0C851 137 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 BRAFP15056 766 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 CA4P22748 312 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 HTR7P34969 479 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 ARL4AP40617 200 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 FOLR3P41439 243 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 SSR1P43307 286 aaKnown RBP6.72□□□□□ -1.33
HDAC1-204ENST00000471488 PREPP48147 710 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 SPINT3P49223 89 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 KLK7P49862 253 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 FOXL2P58012 376 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 SRSF11Q05519 484 aaKnown RBP6.72□□□□□ -1.33
HDAC1-204ENST00000471488 PTP4A2Q12974 167 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 XRCC4Q13426 336 aa6.72□□□□□ -1.33
HDAC1-204ENST00000471488 GSE1Q14687 1217 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms