RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 IMPDH1P20839 514 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 DGKAP23743 735 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 ARFIP2P53365 341 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 NAGLUP54802 743 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 HNRNPH2P55795 449 aaKnown RBP9.26□□□□□ -0.93
VPS52-216ENST00000471309 NAA20P61599 178 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 RPS14P62263 151 aaKnown RBP9.26□□□□□ -0.93
VPS52-216ENST00000471309 HERVK_113P63132 956 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 MRPS21P82921 87 aaKnown RBP9.26□□□□□ -0.93
VPS52-216ENST00000471309 GALNT1Q10472 559 aaPredicted RBP9.26□□□□□ -0.93
VPS52-216ENST00000471309 SF3A3Q12874 501 aaKnown RBP eCLIP9.26□□□□□ -0.931e-6■■□□□ 13.6
VPS52-216ENST00000471309 IFT88Q13099 833 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 PRKAA1Q13131 559 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 TSNQ15631 228 aaKnown RBP9.26□□□□□ -0.93
VPS52-216ENST00000471309 LEXMQ3ZCV2 418 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 HSF5Q4G112 596 aaPredicted RBP9.26□□□□□ -0.93
VPS52-216ENST00000471309 C2orf27AQ580R0 203 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 ATG14Q6ZNE5 492 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 FRMD7Q6ZUT3 714 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 TRPM8Q7Z2W7 1104 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 ADAMTSL2Q86TH1 951 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 PHYKPLQ8IUZ5 450 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 WDR75Q8IWA0 830 aaKnown RBP9.26□□□□□ -0.93
VPS52-216ENST00000471309 KIRREL3Q8IZU9 778 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 MYO1HQ8N1T3 1032 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 GBP7Q8N8V2 638 aaPredicted RBP9.26□□□□□ -0.93
VPS52-216ENST00000471309 IL17RCQ8NAC3 791 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 STON2Q8WXE9 905 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 CCT6BQ92526 530 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 HLA-CQ95604 372 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 FUBP1Q96AE4 644 aaKnown RBP9.26□□□□□ -0.93
VPS52-216ENST00000471309 THOC1Q96FV9 657 aaKnown RBP9.26□□□□□ -0.93
VPS52-216ENST00000471309 CNDP1Q96KN2 507 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 TRMOQ9BU70 441 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 ERVK-6Q9BXR3 956 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 WWP1Q9H0M0 922 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 KCNK13Q9HB14 408 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 CD248Q9HCU0 757 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 SARS2Q9NP81 518 aaKnown RBP9.26□□□□□ -0.93
VPS52-216ENST00000471309 SLC2A4RGQ9NR83 387 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 ABCF3Q9NUQ8 709 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 KCTD5Q9NXV2 234 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 DCTN4Q9UJW0 460 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 IKZF3Q9UKT9 509 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 RNF112Q9ULX5 631 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.26□□□□□ -0.93
VPS52-216ENST00000471309 RAP2CQ9Y3L5 183 aa9.26□□□□□ -0.93
VPS52-216ENST00000471309 A0A1W2PQF6 199 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 SUPT3HB4E1H0 165 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 STX16-NPEPL1H3BU86 382 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 UBXN8O00124 270 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 STX16O14662 325 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 KPNA5O15131 536 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 SGTAO43765 313 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 LZTS3O60299 673 aaPredicted RBP9.25□□□□□ -0.93
VPS52-216ENST00000471309 ADAM23O75077 832 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 SUPT3HO75486 399 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 TRIM16O95361 564 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 KLF8O95600 359 aaPredicted RBP9.25□□□□□ -0.93
VPS52-216ENST00000471309 CHRNGP07510 517 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 SRFP11831 508 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 HOXB2P14652 356 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 FOSL2P15408 326 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 ITGB6P18564 788 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 MSH3P20585 1137 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 AOAHP28039 575 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 KCNC1P48547 511 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 AQP5P55064 265 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 TAS2R38P59533 333 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 ZBTB16Q05516 673 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 GBX1Q14549 363 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 AGERQ15109 404 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 SKIV2LQ15477 1246 aaKnown RBP9.25□□□□□ -0.93
VPS52-216ENST00000471309 CCDC85BQ15834 202 aaPredicted RBP9.25□□□□□ -0.93
VPS52-216ENST00000471309 FBXO43Q4G163 708 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 KHDC1Q4VXA5 237 aaKnown RBP9.25□□□□□ -0.93
VPS52-216ENST00000471309 ACSBG2Q5FVE4 666 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 ARL13AQ5H913 290 aaPredicted RBP9.25□□□□□ -0.93
VPS52-216ENST00000471309 CFAP157Q5JU67 520 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 SPDYAQ5MJ70 313 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 ZNF678Q5SXM1 525 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 KIAA1211LQ6NV74 962 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 GPR153Q6NV75 609 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 CCDC121Q6ZUS5 278 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 RAB44Q7Z6P3 723 aaPredicted RBP9.25□□□□□ -0.93
VPS52-216ENST00000471309 LSMEM2Q8N112 164 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 HDDC3Q8N4P3 179 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 CCNYL1Q8N7R7 359 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 ZNF781Q8N8C0 355 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 PTGR2Q8N8N7 351 aaPredicted RBP9.25□□□□□ -0.93
VPS52-216ENST00000471309 EXT2Q93063 718 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 ASB2Q96Q27 587 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 CDX2Q99626 313 aaPredicted RBP9.25□□□□□ -0.93
VPS52-216ENST00000471309 C1QTNF3Q9BXJ4 246 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 ZCCHC2Q9C0B9 1178 aaKnown RBP9.25□□□□□ -0.93
VPS52-216ENST00000471309 ILKAPQ9H0C8 392 aaPredicted RBP9.25□□□□□ -0.93
VPS52-216ENST00000471309 KDM4CQ9H3R0 1056 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 GSTO2Q9H4Y5 243 aa9.25□□□□□ -0.93
VPS52-216ENST00000471309 EML4Q9HC35 981 aaKnown RBP9.25□□□□□ -0.93
VPS52-216ENST00000471309 CYP4F12Q9HCS2 524 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 426.3 ms