RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 GOLGA8KD6RF30 607 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 LMO7DNF2Z398 122 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 H3BM21 787 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 GOLGA8TH3BQL2 631 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 QSOX1O00391 747 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 PRMT5O14744 637 aaPredicted RBP12.45□□□□□ -0.42
SND1-209ENST00000470723 SCAMP1O15126 338 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 PFDN6O15212 129 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 KMOO15229 486 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 OR1I1O60431 355 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 MTX2O75431 263 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 FAM153BP0C7A2 387 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 GIMD1P0DJR0 217 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 MYBL2P10244 700 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 ZNF7P17097 686 aaPredicted RBP12.45□□□□□ -0.42
SND1-209ENST00000470723 DGKAP23743 735 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 MCM3P25205 808 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 GABRB3P28472 473 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 EPHA8P29322 1005 aaPredicted RBP12.45□□□□□ -0.42
SND1-209ENST00000470723 CTSCP53634 463 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 DMPKQ09013 629 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 MGAT5Q09328 741 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 ILF2Q12905 390 aaKnown RBP12.45□□□□□ -0.42
SND1-209ENST00000470723 SUZ12Q15022 739 aaKnown RBP12.45□□□□□ -0.42
SND1-209ENST00000470723 FAM153CQ494X1 144 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 ZNF542PQ5EBM4 170 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 RNF187Q5TA31 235 aaPredicted RBP12.45□□□□□ -0.42
SND1-209ENST00000470723 OGFOD3Q6PK18 319 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 TRMT10CQ7L0Y3 403 aaKnown RBP12.45□□□□□ -0.42
SND1-209ENST00000470723 CCDC25Q86WR0 208 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 NRROSQ86YC3 692 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 GALNT13Q8IUC8 556 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 PNPLA1Q8N8W4 532 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 GDAP1Q8TB36 358 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 LPGAT1Q92604 370 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 CFAP36Q96G28 342 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 PDXPQ96GD0 296 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 BIRC8Q96P09 236 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 TIMM29Q9BSF4 260 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 FAM167BQ9BTA0 163 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 MCMBPQ9BTE3 642 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 BOCQ9BWV1 1114 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 PARD6BQ9BYG5 372 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 CLPBQ9H078 707 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 TMEM168Q9H0V1 697 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 CARS2Q9HA77 564 aaKnown RBP12.45□□□□□ -0.42
SND1-209ENST00000470723 ARFGAP3Q9NP61 516 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 TMEM9BQ9NQ34 198 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 LATS2Q9NRM7 1088 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 TM7SF3Q9NS93 570 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 GULP1Q9UBP9 304 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 ZNHIT2Q9UHR6 403 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 PRSS21Q9Y6M0 314 aa12.45□□□□□ -0.42
SND1-209ENST00000470723 GOLGA4Q13439 2230 aaKnown RBP12.44□□□□□ -0.42
SND1-209ENST00000470723 ZFC3H1O60293 1989 aaKnown RBP12.44□□□□□ -0.42
SND1-209ENST00000470723 TCRBV9S1A1TA0A576 114 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 NEMP2A6NFY4 417 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 MGAT4DA6NG13 374 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 FAM159BA6NKW6 160 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 TM4SF5O14894 197 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 YY2O15391 372 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 NDUFS3O75489 264 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 POP7O75817 140 aaKnown RBP12.44□□□□□ -0.42
SND1-209ENST00000470723 AHSGP02765 367 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 CD59P13987 128 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 CD9P21926 228 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 PMLP29590 882 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 GNPDA1P46926 289 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 PRLHRP49683 370 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 CCT8P50990 548 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 ATXN3P54252 364 aaPredicted RBP12.44□□□□□ -0.42
SND1-209ENST00000470723 CTBSQ01459 385 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 CTBP1Q13363 440 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 ELOCQ15369 112 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 DOK6Q6PKX4 331 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 WASH2PQ6VEQ5 465 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 LDB1Q86U70 411 aaPredicted RBP12.44□□□□□ -0.42
SND1-209ENST00000470723 LRRTM4Q86VH4 590 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 SLC26A11Q86WA9 606 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 DENND6AQ8IWF6 608 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 CLDN19Q8N6F1 224 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 CCDC97Q96F63 343 aaPredicted RBP12.44□□□□□ -0.42
SND1-209ENST00000470723 OR2M4Q96R27 311 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 LRRC61Q9BV99 259 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 WASH6PQ9NQA3 447 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 IARS2Q9NSE4 1012 aaKnown RBP12.44□□□□□ -0.42
SND1-209ENST00000470723 NINJ2Q9NZG7 142 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 IL1RAPL1Q9NZN1 696 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 SLC23A2Q9UGH3 650 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 APOBEC3BQ9UH17 382 aaKnown RBP12.44□□□□□ -0.42
SND1-209ENST00000470723 RABGEF1Q9UJ41 708 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 PCOLCE2Q9UKZ9 415 aa12.44□□□□□ -0.42
SND1-209ENST00000470723 F8W8V4 182 aa12.43□□□□□ -0.42
SND1-209ENST00000470723 AQP9O43315 295 aa12.43□□□□□ -0.42
SND1-209ENST00000470723 HAUS5O94927 633 aa12.43□□□□□ -0.42
SND1-209ENST00000470723 ESR1P03372 595 aa12.43□□□□□ -0.42
SND1-209ENST00000470723 CTSEP14091 401 aa12.43□□□□□ -0.42
SND1-209ENST00000470723 VSNL1P62760 191 aa12.43□□□□□ -0.42
SND1-209ENST00000470723 ARHGAP8P85298 464 aa12.43□□□□□ -0.42
SND1-209ENST00000470723 GTF2H3Q13889 308 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms