RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 RPS14P62263 151 aaKnown RBP4.82□□□□□ -1.64
VPS8-219ENST00000469479 COG7P83436 770 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 SRSF2Q01130 221 aaKnown RBP4.82□□□□□ -1.64
VPS8-219ENST00000469479 STAT4Q14765 748 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 SOWAHAQ2M3V2 549 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 BMP2KLQ5H9B9 411 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 MANEAQ5SRI9 462 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 FHL5Q5TD97 284 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 NCEH1Q6PIU2 408 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 IRF2BP2Q7Z5L9 587 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 WDR53Q7Z5U6 358 aaPredicted RBP4.82□□□□□ -1.64
VPS8-219ENST00000469479 PRPF39Q86UA1 669 aaKnown RBP4.82□□□□□ -1.64
VPS8-219ENST00000469479 JAZF1Q86VZ6 243 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 CACUL1Q86Y37 369 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 RHOT1Q8IXI2 618 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 SLC34A3Q8N130 599 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 CPXM2Q8N436 756 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 CSGALNACT2Q8N6G5 542 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 SYT2Q8N9I0 419 aaPredicted RBP4.82□□□□□ -1.64
VPS8-219ENST00000469479 KDM1BQ8NB78 822 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 NAT6Q93015 286 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 TMEM159Q96B96 161 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 PIWIL1Q96J94 861 aaKnown RBP4.82□□□□□ -1.64
VPS8-219ENST00000469479 TNIP3Q96KP6 325 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 OMDQ99983 421 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 TM6SF1Q9BZW5 370 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 B3GNT4Q9C0J1 378 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 RSPH9Q9H1X1 276 aaPredicted RBP4.82□□□□□ -1.64
VPS8-219ENST00000469479 PABPC3Q9H361 631 aaKnown RBP4.82□□□□□ -1.64
VPS8-219ENST00000469479 ST6GALNAC4Q9H4F1 302 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 PARVGQ9HBI0 331 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 POLD4Q9HCU8 107 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 FANCLQ9NW38 375 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 TRNAU1APQ9NX07 287 aaKnown RBP4.82□□□□□ -1.64
VPS8-219ENST00000469479 DNAJC28Q9NX36 388 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 FBXL12Q9NXK8 326 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 IL37Q9NZH6 218 aa4.82□□□□□ -1.64
VPS8-219ENST00000469479 NOL7Q9UMY1 257 aaKnown RBP4.82□□□□□ -1.64
VPS8-219ENST00000469479 MYO18AQ92614 2054 aaKnown RBP4.82□□□□□ -1.64
VPS8-219ENST00000469479 NIPBLQ6KC79 2804 aaeCLIP4.81□□□□□ -1.64
VPS8-219ENST00000469479 FAM47DPA6NHR8 397 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 E9PMD0 336 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 PRAMEF26H0Y7S4 382 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 SLC7A4O43246 635 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 TBCAO75347 108 aaKnown RBP4.81□□□□□ -1.64
VPS8-219ENST00000469479 VPS4BO75351 444 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 RNASEH2AO75792 299 aaKnown RBP4.81□□□□□ -1.64
VPS8-219ENST00000469479 REC8O95072 547 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 TNNC2P02585 160 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 WNT1P04628 370 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 KRT19P08727 400 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 SBK3P0C264 359 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 TMEM191BP0C7N4 346 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 GNL1P36915 607 aaPredicted RBP4.81□□□□□ -1.64
VPS8-219ENST00000469479 PRPHP41219 470 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 ZNF131P52739 623 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 ST8SIA6P61647 398 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 HNRNPKP61978 463 aaKnown RBP eCLIP4.81□□□□□ -1.64
VPS8-219ENST00000469479 PSMC1P62191 440 aaKnown RBP4.81□□□□□ -1.64
VPS8-219ENST00000469479 GTF2BQ00403 316 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 CCDC15Q0P6D6 951 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 FAPQ12884 760 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 ANKRD1Q15327 319 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 CST6Q15828 149 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 SETMARQ53H47 684 aaPredicted RBP4.81□□□□□ -1.64
VPS8-219ENST00000469479 MDH1BQ5I0G3 518 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 HYIQ5T013 277 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 BRSK2Q8IWQ3 736 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 MYCT1Q8N699 235 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 TMIEQ8NEW7 156 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 C9orf43Q8TAL5 461 aaPredicted RBP4.81□□□□□ -1.64
VPS8-219ENST00000469479 IFI44Q8TCB0 444 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 KBTBD7Q8WVZ9 684 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 POMGNT1Q8WZA1 660 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 GTF3C6Q969F1 213 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 MIB2Q96AX9 1013 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 SMARCD1Q96GM5 515 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 ATXN7L3BQ96GX2 97 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 HPDLQ96IR7 371 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 ANKRD36BP1Q96IX9 119 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 CDK5RAP3Q96JB5 506 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 APOLD1Q96LR9 279 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 C5orf34Q96MH7 638 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 DNAI2Q9GZS0 605 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 PRSS16Q9NQE7 514 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 GJB4Q9NTQ9 266 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 RBAKQ9NYW8 714 aaPredicted RBP4.81□□□□□ -1.64
VPS8-219ENST00000469479 CHORDC1Q9UHD1 332 aaPredicted RBP4.81□□□□□ -1.64
VPS8-219ENST00000469479 VPS4AQ9UN37 437 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 EXOC7Q9UPT5 735 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 CSNK1G3Q9Y6M4 447 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 ADGRG4Q8IZF6 3080 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 ANAPC1Q9H1A4 1944 aa4.81□□□□□ -1.64
VPS8-219ENST00000469479 APCP25054 2843 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 MYLKQ15746 1914 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.8□□□□□ -1.64
VPS8-219ENST00000469479 TARSL2A2RTX5 802 aaKnown RBP4.8□□□□□ -1.64
VPS8-219ENST00000469479 C10orf142B7Z368 130 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 E5RJQ4 531 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 QSOX1O00391 747 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms