RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 G6PDP11413 515 aa17.63■□□□□ 0.41
MCF2L-221ENST00000469415 TTPAP49638 278 aa17.63■□□□□ 0.41
MCF2L-221ENST00000469415 GSK3BP49841 420 aa17.63■□□□□ 0.41
MCF2L-221ENST00000469415 BFSP2Q13515 415 aa17.63■□□□□ 0.41
MCF2L-221ENST00000469415 PTGR1Q14914 329 aa17.63■□□□□ 0.41
MCF2L-221ENST00000469415 TICAM1Q8IUC6 712 aa17.63■□□□□ 0.41
MCF2L-221ENST00000469415 ST13P5Q8NFI4 369 aaPredicted RBP17.63■□□□□ 0.41
MCF2L-221ENST00000469415 RHEBL1Q8TAI7 183 aa17.63■□□□□ 0.41
MCF2L-221ENST00000469415 CAPNS2Q96L46 248 aa17.63■□□□□ 0.41
MCF2L-221ENST00000469415 KCTD14Q9BQ13 255 aaPredicted RBP17.63■□□□□ 0.41
MCF2L-221ENST00000469415 TBCDQ9BTW9 1192 aa17.63■□□□□ 0.41
MCF2L-221ENST00000469415 FAM192AQ9GZU8 254 aa17.63■□□□□ 0.41
MCF2L-221ENST00000469415 HIPK3Q9H422 1215 aa17.63■□□□□ 0.41
MCF2L-221ENST00000469415 INTS10Q9NVR2 710 aaKnown RBP17.63■□□□□ 0.41
MCF2L-221ENST00000469415 DENRO43583 198 aaKnown RBP17.62■□□□□ 0.41
MCF2L-221ENST00000469415 SLC25A14O95258 325 aaPredicted RBP17.62■□□□□ 0.41
MCF2L-221ENST00000469415 SLC2A4P14672 509 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 SLC7A1P30825 629 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 POM121L1PQ3SYA9 428 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 CWF19L1Q69YN2 538 aaKnown RBP17.62■□□□□ 0.41
MCF2L-221ENST00000469415 ADGRG2Q8IZP9 1017 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 NKAPQ8N5F7 415 aaKnown RBP17.62■□□□□ 0.41
MCF2L-221ENST00000469415 VPS50Q96JG6 964 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 CD84Q9UIB8 345 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 RAB26Q9ULW5 256 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 DOCK6Q96HP0 2047 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 hCG_2014768A0A024R1R8 64 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 A0A1W2PQ67 120 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 ASPDHA6ND91 283 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 MTX2O75431 263 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 ESRRBO95718 433 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 F11P03951 625 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 SLC26A3P40879 764 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 YAP1P46937 504 aaKnown RBP17.62■□□□□ 0.41
MCF2L-221ENST00000469415 MAPK10P53779 464 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 ELAVL2Q12926 359 aaKnown RBP17.62■□□□□ 0.41
MCF2L-221ENST00000469415 PLCL1Q15111 1095 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 PHKG1Q16816 387 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 C6orf136Q5SQH8 315 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 CATSPER1Q8NEC5 780 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 OR4F6Q8NGB9 312 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 OR56A4Q8NGH8 313 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 ZFP28Q8NHY6 868 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 RNF145Q96MT1 663 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 CLPBQ9H078 707 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 ALG2Q9H553 416 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 IPPKQ9H8X2 491 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 ZNF334Q9HCZ1 680 aaPredicted RBP17.62■□□□□ 0.41
MCF2L-221ENST00000469415 SDR39U1Q9NRG7 319 aaPredicted RBP17.62■□□□□ 0.41
MCF2L-221ENST00000469415 ZNF711Q9Y462 761 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 MAGED1Q9Y5V3 778 aaPredicted RBP17.62■□□□□ 0.41
MCF2L-221ENST00000469415 GPR45Q9Y5Y3 372 aa17.62■□□□□ 0.41
MCF2L-221ENST00000469415 UPK3BL1B0FP48 263 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 UPK3BL2E5RIL1 263 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 TNFAIP8O95379 198 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 FGF4P08620 206 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 ATP6V0D1P61421 351 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 RPL38P63173 70 aaKnown RBP17.61■□□□□ 0.41
MCF2L-221ENST00000469415 NFKB2Q00653 900 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 GALNT1Q10472 559 aaPredicted RBP17.61■□□□□ 0.41
MCF2L-221ENST00000469415 SELPLGQ14242 412 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 ATP6AP1LQ52LC2 224 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 RFTN2Q52LD8 501 aaPredicted RBP17.61■□□□□ 0.41
MCF2L-221ENST00000469415 BLOC1S3Q6QNY0 202 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 KIAA2013Q8IYS2 634 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 SLC22A15Q8IZD6 547 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 MAGEE2Q8TD90 523 aaPredicted RBP17.61■□□□□ 0.41
MCF2L-221ENST00000469415 TMEM169Q96HH4 297 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 FBXL20Q96IG2 436 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 ZNF599Q96NL3 588 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 OAS3Q9Y6K5 1087 aaKnown RBP17.61■□□□□ 0.41
MCF2L-221ENST00000469415 IDO1P14902 403 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 HMOX2P30519 316 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 POLR2JP52435 117 aaKnown RBP17.61■□□□□ 0.41
MCF2L-221ENST00000469415 LAMB3Q13751 1172 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 ARHGEF7Q14155 803 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 ABRAXAS2Q15018 415 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 Q6ZSR9 355 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 FAM126BQ8IXS8 530 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 CMTR2Q8IYT2 770 aaKnown RBP17.61■□□□□ 0.41
MCF2L-221ENST00000469415 SFRP1Q8N474 314 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 ZNF461Q8TAF7 563 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 KLQ9UEF7 1012 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 CRLS1Q9UJA2 301 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 E2F3O00716 465 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 HTRA2O43464 458 aaPredicted RBP17.61■□□□□ 0.41
MCF2L-221ENST00000469415 C8BP07358 591 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 RPS17P08708 135 aaKnown RBP17.61■□□□□ 0.41
MCF2L-221ENST00000469415 NFKBIAP25963 317 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 HOXD10P28358 340 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 CTSOP43234 321 aaPredicted RBP17.61■□□□□ 0.41
MCF2L-221ENST00000469415 RPL5P46777 297 aaKnown RBP17.61■□□□□ 0.41
MCF2L-221ENST00000469415 ACADVLP49748 655 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 SUOXP51687 545 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 OR4D2P58180 307 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 ROR2Q01974 943 aaKnown RBP17.61■□□□□ 0.41
MCF2L-221ENST00000469415 GRM2Q14416 872 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 VEPH1Q14D04 833 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 PYCR2Q96C36 320 aa17.61■□□□□ 0.41
MCF2L-221ENST00000469415 GID8Q9NWU2 228 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms