RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 LRRTM4Q86VH4 590 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 HPS6Q86YV9 775 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 RHOT1Q8IXI2 618 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 GPR26Q8NDV2 337 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 MR1Q95460 341 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 GLYATL1Q969I3 302 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 SNRNP40Q96DI7 357 aaKnown RBP12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 ZNF514Q96K75 400 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 C5orf34Q96MH7 638 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 MAP3K3Q99759 626 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 ZSCAN5AQ9BUG6 496 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 NUP62CLQ9H1M0 184 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 IGSF5Q9NSI5 407 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 TRIM10Q9UDY6 481 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 LIMA1Q9UHB6 759 aaKnown RBP12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 SRPK3Q9UPE1 567 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 SLC5A6Q9Y289 635 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 WDR37Q9Y2I8 494 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 SCINQ9Y6U3 715 aa12.57□□□□□ -0.4
TRAPPC12-216ENST00000469400 ZNF185O15231 689 aa12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 MFSD11O43934 449 aa12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 CPNE3O75131 537 aaKnown RBP12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 SCRG1O75711 98 aa12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 JCHAINP01591 159 aa12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 HLA-DQB2P05538 268 aa12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 POU3F2P20265 443 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 IDSP22304 550 aa12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 ELAVL4P26378 380 aaKnown RBP12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 MMRN1Q13201 1228 aa12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 GPS2Q13227 327 aa12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 CCDC122Q5T0U0 273 aa12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 TIGD7Q6NT04 549 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 TRAM1L1Q8N609 369 aa12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 SLC38A9Q8NBW4 561 aa12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 LRRN4Q8WUT4 740 aa12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 TEKT4Q8WW24 435 aa12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 ZNF653Q96CK0 615 aa12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 NUP85Q9BW27 656 aa12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 CHST8Q9H2A9 424 aa12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 ZFYVE1Q9HBF4 777 aa12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 HAUS2Q9NVX0 235 aa12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 MYO1AQ9UBC5 1043 aa12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 AMACRQ9UHK6 382 aa12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 G3BP2Q9UN86 482 aaKnown RBP12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 SNX7Q9UNH6 387 aa12.56□□□□□ -0.4
TRAPPC12-216ENST00000469400 LRRC10BA6NIK2 292 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 CDK14O94921 469 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 MMP2P08253 660 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 CD48P09326 243 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 GZMAP12544 262 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 FECHP22830 423 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 CCNCP24863 283 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 ARL4DP49703 201 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 ITGA1P56199 1179 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 DCDC1P59894 354 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 TUBB4BP68371 445 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 HSD11B2P80365 405 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 SLC25A11Q02978 314 aaKnown RBP12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 TUBB2AQ13885 445 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 KRT81Q14533 505 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 IFI16Q16666 785 aaKnown RBP12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 PLEKHN1Q494U1 663 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 KHDC1Q4VXA5 237 aaKnown RBP12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 ZRANB3Q5FWF4 1079 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 FAM69BQ5VUD6 431 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 PDPK2PQ6A1A2 396 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 LCN10Q6JVE6 187 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 KMT5CQ86Y97 462 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 TMEM126BQ8IUX1 230 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 D2HGDHQ8N465 521 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 CISD2Q8N5K1 135 aaKnown RBP12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 ENDOVQ8N8Q3 282 aaKnown RBP12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 ANKRD20A12PQ8NF67 263 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 FATE1Q969F0 183 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 TSGA13Q96PP4 275 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 PHF12Q96QT6 1004 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 SMAD5Q99717 465 aaKnown RBP12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 TUBB2BQ9BVA1 445 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 ADGRE3Q9BY15 652 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 MRPL47Q9HD33 250 aaKnown RBP12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 ASF1BQ9NVP2 202 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 GPR83Q9NYM4 423 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 SHOC2Q9UQ13 582 aa12.55□□□□□ -0.4
TRAPPC12-216ENST00000469400 POLEQ07864 2286 aa12.54□□□□□ -0.4
TRAPPC12-216ENST00000469400 POLQO75417 2590 aa12.54□□□□□ -0.4
TRAPPC12-216ENST00000469400 C2CD3Q4AC94 2353 aa12.54□□□□□ -0.4
TRAPPC12-216ENST00000469400 UBA6A0AVT1 1052 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC12-216ENST00000469400 ANKUB1A6NFN9 424 aa12.54□□□□□ -0.4
TRAPPC12-216ENST00000469400 DDX3XO00571 662 aaKnown RBP eCLIP12.54□□□□□ -0.4
TRAPPC12-216ENST00000469400 VEGFDO43915 354 aa12.54□□□□□ -0.4
TRAPPC12-216ENST00000469400 KLK3P07288 261 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC12-216ENST00000469400 RAB40ALP0C0E4 278 aa12.54□□□□□ -0.4
TRAPPC12-216ENST00000469400 PIRTP0C851 137 aa12.54□□□□□ -0.4
TRAPPC12-216ENST00000469400 MYBL1P10243 752 aa12.54□□□□□ -0.4
TRAPPC12-216ENST00000469400 CD86P42081 329 aa12.54□□□□□ -0.4
TRAPPC12-216ENST00000469400 VAV2P52735 878 aa12.54□□□□□ -0.4
TRAPPC12-216ENST00000469400 RAPSNQ13702 412 aa12.54□□□□□ -0.4
TRAPPC12-216ENST00000469400 GALNT3Q14435 633 aa12.54□□□□□ -0.4
TRAPPC12-216ENST00000469400 PIGHQ14442 188 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC12-216ENST00000469400 PAFAH1B3Q15102 231 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms