RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 TFDP3Q5H9I0 405 aa24.06■■□□□ 1.44
PTCH1-210ENST00000468211 BORAQ6PGQ7 559 aa24.06■■□□□ 1.44
PTCH1-210ENST00000468211 TRAPPC5Q8IUR0 188 aa24.06■■□□□ 1.44
PTCH1-210ENST00000468211 P3H4Q92791 437 aa24.06■■□□□ 1.44
PTCH1-210ENST00000468211 FCRL5Q96RD9 977 aa24.06■■□□□ 1.44
PTCH1-210ENST00000468211 ZPBPQ9BS86 351 aa24.06■■□□□ 1.44
PTCH1-210ENST00000468211 C10orf88Q9H8K7 445 aa24.06■■□□□ 1.44
PTCH1-210ENST00000468211 UGT1A7Q9HAW7 530 aa24.06■■□□□ 1.44
PTCH1-210ENST00000468211 UGT1A10Q9HAW8 530 aa24.06■■□□□ 1.44
PTCH1-210ENST00000468211 UGT1A8Q9HAW9 530 aa24.06■■□□□ 1.44
PTCH1-210ENST00000468211 SLC40A1Q9NP59 571 aa24.06■■□□□ 1.44
PTCH1-210ENST00000468211 IL17CQ9P0M4 197 aa24.06■■□□□ 1.44
PTCH1-210ENST00000468211 ZNF891A8MT65 544 aaPredicted RBP24.05■■□□□ 1.44
PTCH1-210ENST00000468211 GAPDHSO14556 408 aaPredicted RBP24.05■■□□□ 1.44
PTCH1-210ENST00000468211 CAPN5O15484 640 aaPredicted RBP24.05■■□□□ 1.44
PTCH1-210ENST00000468211 SUV39H1O43463 412 aa24.05■■□□□ 1.44
PTCH1-210ENST00000468211 EPOP01588 193 aa24.05■■□□□ 1.44
PTCH1-210ENST00000468211 SFTPCP11686 197 aa24.05■■□□□ 1.44
PTCH1-210ENST00000468211 AMD1P17707 334 aa24.05■■□□□ 1.44
PTCH1-210ENST00000468211 IDSP22304 550 aa24.05■■□□□ 1.44
PTCH1-210ENST00000468211 SEPHS1P49903 392 aa24.05■■□□□ 1.44
PTCH1-210ENST00000468211 CTSCP53634 463 aa24.05■■□□□ 1.44
PTCH1-210ENST00000468211 GPR18Q14330 331 aa24.05■■□□□ 1.44
PTCH1-210ENST00000468211 AGAP9Q5VTM2 703 aa24.05■■□□□ 1.44
PTCH1-210ENST00000468211 WASH2PQ6VEQ5 465 aa24.05■■□□□ 1.44
PTCH1-210ENST00000468211 PID1Q7Z2X4 250 aa24.05■■□□□ 1.44
PTCH1-210ENST00000468211 KATNAL2Q8IYT4 538 aa24.05■■□□□ 1.44
PTCH1-210ENST00000468211 TC2NQ8N9U0 490 aa24.05■■□□□ 1.44
PTCH1-210ENST00000468211 IPMKQ8NFU5 416 aa24.05■■□□□ 1.44
PTCH1-210ENST00000468211 GDAP1Q8TB36 358 aa24.05■■□□□ 1.44
PTCH1-210ENST00000468211 KRT35Q92764 455 aa24.05■■□□□ 1.44
PTCH1-210ENST00000468211 QKIQ96PU8 341 aaKnown RBP eCLIP24.05■■□□□ 1.44
PTCH1-210ENST00000468211 SLC25A18Q9H1K4 315 aa24.05■■□□□ 1.44
PTCH1-210ENST00000468211 TRABDQ9H4I3 376 aa24.05■■□□□ 1.44
PTCH1-210ENST00000468211 CLMPQ9H6B4 373 aa24.05■■□□□ 1.44
PTCH1-210ENST00000468211 WASH6PQ9NQA3 447 aa24.05■■□□□ 1.44
PTCH1-210ENST00000468211 POT1Q9NUX5 634 aa24.05■■□□□ 1.44
PTCH1-210ENST00000468211 TERTO14746 1132 aaKnown RBP24.04■■□□□ 1.44
PTCH1-210ENST00000468211 PPFIA2O75334 1257 aa24.04■■□□□ 1.44
PTCH1-210ENST00000468211 PRKAR1AP10644 381 aa24.04■■□□□ 1.44
PTCH1-210ENST00000468211 POLE2P56282 527 aa24.04■■□□□ 1.44
PTCH1-210ENST00000468211 FOXM1Q08050 763 aa24.04■■□□□ 1.44
PTCH1-210ENST00000468211 PTPRCAPQ14761 206 aa24.04■■□□□ 1.44
PTCH1-210ENST00000468211 SLC1A5Q15758 541 aa24.04■■□□□ 1.44
PTCH1-210ENST00000468211 FAM151BQ6UXP7 276 aa24.04■■□□□ 1.44
PTCH1-210ENST00000468211 FAM83HQ6ZRV2 1179 aaPredicted RBP24.04■■□□□ 1.44
PTCH1-210ENST00000468211 RASGEF1AQ8N9B8 481 aa24.04■■□□□ 1.44
PTCH1-210ENST00000468211 BLOC1S5Q8TDH9 187 aa24.04■■□□□ 1.44
PTCH1-210ENST00000468211 GORASP1Q9BQQ3 440 aa24.04■■□□□ 1.44
PTCH1-210ENST00000468211 HEMGNQ9BXL5 484 aa24.04■■□□□ 1.44
PTCH1-210ENST00000468211 UBR5O95071 2799 aaPredicted RBP24.03■■□□□ 1.44
PTCH1-210ENST00000468211 MTSS1O43312 755 aa24.03■■□□□ 1.44
PTCH1-210ENST00000468211 ZRANB2O95218 330 aaKnown RBP eCLIP24.03■■□□□ 1.44
PTCH1-210ENST00000468211 SPAM1P38567 509 aa24.03■■□□□ 1.44
PTCH1-210ENST00000468211 KCNC4Q03721 635 aa24.03■■□□□ 1.44
PTCH1-210ENST00000468211 ABHD18Q0P651 414 aa24.03■■□□□ 1.44
PTCH1-210ENST00000468211 CCDC50Q8IVM0 306 aa24.03■■□□□ 1.44
PTCH1-210ENST00000468211 GPR150Q8NGU9 434 aa24.03■■□□□ 1.44
PTCH1-210ENST00000468211 LCA5LO95447 670 aa24.02■■□□□ 1.44
PTCH1-210ENST00000468211 F8A1P23610 371 aa24.02■■□□□ 1.44
PTCH1-210ENST00000468211 OAS2P29728 719 aaKnown RBP24.02■■□□□ 1.44
PTCH1-210ENST00000468211 STAT5AP42229 794 aa24.02■■□□□ 1.44
PTCH1-210ENST00000468211 CAPZBP47756 277 aa24.02■■□□□ 1.44
PTCH1-210ENST00000468211 PPP1CAP62136 330 aa24.02■■□□□ 1.44
PTCH1-210ENST00000468211 GTF2H3Q13889 308 aa24.02■■□□□ 1.44
PTCH1-210ENST00000468211 ATP1A1-AS1Q5TC04 95 aa24.02■■□□□ 1.44
PTCH1-210ENST00000468211 FAM92BQ6ZTR7 304 aa24.02■■□□□ 1.44
PTCH1-210ENST00000468211 GLT6D1Q7Z4J2 308 aa24.02■■□□□ 1.44
PTCH1-210ENST00000468211 RCOR2Q8IZ40 523 aa24.02■■□□□ 1.44
PTCH1-210ENST00000468211 DTX3LQ8TDB6 740 aa24.02■■□□□ 1.44
PTCH1-210ENST00000468211 NAT14Q8WUY8 206 aa24.02■■□□□ 1.44
PTCH1-210ENST00000468211 KIAA1143Q96AT1 154 aaPredicted RBP24.02■■□□□ 1.44
PTCH1-210ENST00000468211 CXorf40BQ96DE9 158 aa24.02■■□□□ 1.44
PTCH1-210ENST00000468211 OR6C1Q96RD1 312 aa24.02■■□□□ 1.44
PTCH1-210ENST00000468211 ANP32EQ9BTT0 268 aa24.02■■□□□ 1.44
PTCH1-210ENST00000468211 ADNPQ9H2P0 1102 aa24.02■■□□□ 1.44
PTCH1-210ENST00000468211 ZNF768Q9H5H4 540 aaKnown RBP24.02■■□□□ 1.44
PTCH1-210ENST00000468211 PCDHA13Q9Y5I0 950 aa24.02■■□□□ 1.44
PTCH1-210ENST00000468211 MRPS18BQ9Y676 258 aaKnown RBP24.02■■□□□ 1.44
PTCH1-210ENST00000468211 GLYATL1P3A0A0U1RQE8 302 aa24.01■■□□□ 1.43
PTCH1-210ENST00000468211 POP7O75817 140 aaKnown RBP24.01■■□□□ 1.43
PTCH1-210ENST00000468211 AGTP01019 485 aa24.01■■□□□ 1.43
PTCH1-210ENST00000468211 CDC20Q12834 499 aa24.01■■□□□ 1.43
PTCH1-210ENST00000468211 KCNAB2Q13303 367 aa24.01■■□□□ 1.43
PTCH1-210ENST00000468211 MPP3Q13368 585 aa24.01■■□□□ 1.43
PTCH1-210ENST00000468211 PPP2R5EQ16537 467 aa24.01■■□□□ 1.43
PTCH1-210ENST00000468211 GPRC6AQ5T6X5 926 aa24.01■■□□□ 1.43
PTCH1-210ENST00000468211 ATG14Q6ZNE5 492 aa24.01■■□□□ 1.43
PTCH1-210ENST00000468211 PTRH1Q86Y79 214 aaKnown RBP24.01■■□□□ 1.43
PTCH1-210ENST00000468211 DDHD1Q8NEL9 900 aa24.01■■□□□ 1.43
PTCH1-210ENST00000468211 BRSK1Q8TDC3 778 aa24.01■■□□□ 1.43
PTCH1-210ENST00000468211 ELMO2Q96JJ3 720 aa24.01■■□□□ 1.43
PTCH1-210ENST00000468211 TTC25Q96NG3 672 aa24.01■■□□□ 1.43
PTCH1-210ENST00000468211 VAT1Q99536 393 aa24.01■■□□□ 1.43
PTCH1-210ENST00000468211 ULBP3Q9BZM4 244 aa24.01■■□□□ 1.43
PTCH1-210ENST00000468211 HACD3Q9P035 362 aa24.01■■□□□ 1.43
PTCH1-210ENST00000468211 RSPH14Q9UHP6 348 aa24.01■■□□□ 1.43
PTCH1-210ENST00000468211 PSMD13Q9UNM6 376 aa24.01■■□□□ 1.43
PTCH1-210ENST00000468211 OR2AG2A6NM03 316 aa24■■□□□ 1.43
PTCH1-210ENST00000468211 TOX3O15405 576 aaPredicted RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms