RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 RNF157Q96PX1 679 aa13.4□□□□□ -0.26
RPP40-204ENST00000468105 MCCC1Q96RQ3 725 aaPredicted RBP13.4□□□□□ -0.26
RPP40-204ENST00000468105 DPYSL5Q9BPU6 564 aa13.4□□□□□ -0.26
RPP40-204ENST00000468105 L2HGDHQ9H9P8 463 aa13.4□□□□□ -0.26
RPP40-204ENST00000468105 RRAGDQ9NQL2 400 aaPredicted RBP13.4□□□□□ -0.26
RPP40-204ENST00000468105 ETNK2Q9NVF9 386 aa13.4□□□□□ -0.26
RPP40-204ENST00000468105 CWC15Q9P013 229 aaKnown RBP13.4□□□□□ -0.26
RPP40-204ENST00000468105 LUZP4Q9P127 313 aa13.4□□□□□ -0.26
RPP40-204ENST00000468105 KCNK6Q9Y257 313 aa13.4□□□□□ -0.26
RPP40-204ENST00000468105 SLC30A1Q9Y6M5 507 aa13.4□□□□□ -0.26
RPP40-204ENST00000468105 CSMD2Q7Z408 3487 aa13.4□□□□□ -0.26
RPP40-204ENST00000468105 TTLL8A6PVC2 850 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 TCP11X1B4DZS4 312 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 MKRN2OSH3BPM6 223 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 EEF2KO00418 725 aaKnown RBP13.39□□□□□ -0.27
RPP40-204ENST00000468105 ZNF185O15231 689 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 INPP4BO15327 924 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 TJP3O95049 919 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 CPP00450 1065 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 ZFXP17010 805 aaPredicted RBP13.39□□□□□ -0.27
RPP40-204ENST00000468105 GPR1P46091 355 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 PMS2P54278 862 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 AP1S1P61966 158 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 POLR2LP62875 67 aaKnown RBP13.39□□□□□ -0.27
RPP40-204ENST00000468105 CKAP4Q07065 602 aaKnown RBP13.39□□□□□ -0.27
RPP40-204ENST00000468105 IL10RBQ08334 325 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 KLF1Q13351 362 aaPredicted RBP13.39□□□□□ -0.27
RPP40-204ENST00000468105 LAMB3Q13751 1172 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 DPYSQ14117 519 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 SEPT6Q14141 434 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 MAP7Q14244 749 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 LBRQ14739 615 aaKnown RBP13.39□□□□□ -0.27
RPP40-204ENST00000468105 ANKRD20A8PQ5CZ79 823 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 FAM182AQ5T1J6 154 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 SLC9A4Q6AI14 798 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 AADACL2Q6P093 401 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 ADAMTSL4Q6UY14 1074 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 RFX8Q6ZV50 586 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 BBS12Q6ZW61 710 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 ZNF572Q7Z3I7 529 aaPredicted RBP13.39□□□□□ -0.27
RPP40-204ENST00000468105 ESX1Q8N693 406 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 SCRN2Q96FV2 425 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 AHCYL2Q96HN2 611 aaKnown RBP13.39□□□□□ -0.27
RPP40-204ENST00000468105 CSPG4P5Q96PW8 444 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 ULBP3Q9BZM4 244 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 DONSONQ9NYP3 566 aa13.39□□□□□ -0.27
RPP40-204ENST00000468105 MN1Q10571 1320 aaPredicted RBP13.39□□□□□ -0.27
RPP40-204ENST00000468105 ARHGAP42A6NI28 874 aa13.38□□□□□ -0.27
RPP40-204ENST00000468105 FZD6O60353 706 aa13.38□□□□□ -0.27
RPP40-204ENST00000468105 VPS4BO75351 444 aa13.38□□□□□ -0.27
RPP40-204ENST00000468105 KATNA1O75449 491 aa13.38□□□□□ -0.27
RPP40-204ENST00000468105 RFPL1O75677 317 aa13.38□□□□□ -0.27
RPP40-204ENST00000468105 KIAA0754O94854 1291 aa13.38□□□□□ -0.27
RPP40-204ENST00000468105 FGGP02679 453 aa13.38□□□□□ -0.27
RPP40-204ENST00000468105 SEPHS1P49903 392 aa13.38□□□□□ -0.27
RPP40-204ENST00000468105 RPS18P62269 152 aaKnown RBP13.38□□□□□ -0.27
RPP40-204ENST00000468105 MMRN1Q13201 1228 aa13.38□□□□□ -0.27
RPP40-204ENST00000468105 ZNF648Q5T619 568 aaPredicted RBP13.38□□□□□ -0.27
RPP40-204ENST00000468105 CCDC181Q5TID7 509 aa13.38□□□□□ -0.27
RPP40-204ENST00000468105 LRRC66Q68CR7 880 aa13.38□□□□□ -0.27
RPP40-204ENST00000468105 C6orf15Q6UXA7 325 aaPredicted RBP13.38□□□□□ -0.27
RPP40-204ENST00000468105 CHST15Q7LFX5 561 aaPredicted RBP13.38□□□□□ -0.27
RPP40-204ENST00000468105 MS4A14Q96JA4 679 aa13.38□□□□□ -0.27
RPP40-204ENST00000468105 ZPBPQ9BS86 351 aa13.38□□□□□ -0.27
RPP40-204ENST00000468105 EFHD1Q9BUP0 239 aa13.38□□□□□ -0.27
RPP40-204ENST00000468105 MAK16Q9BXY0 300 aaKnown RBP13.38□□□□□ -0.27
RPP40-204ENST00000468105 SP110Q9HB58 689 aa13.38□□□□□ -0.27
RPP40-204ENST00000468105 MLXIPLQ9NP71 852 aa13.38□□□□□ -0.27
RPP40-204ENST00000468105 SARS2Q9NP81 518 aaKnown RBP13.38□□□□□ -0.27
RPP40-204ENST00000468105 DTLQ9NZJ0 730 aa13.38□□□□□ -0.27
RPP40-204ENST00000468105 VPS4AQ9UN37 437 aa13.38□□□□□ -0.27
RPP40-204ENST00000468105 PPIL1Q9Y3C6 166 aa13.38□□□□□ -0.27
RPP40-204ENST00000468105 WIPF3A6NGB9 483 aa13.37□□□□□ -0.27
RPP40-204ENST00000468105 ENO4A6NNW6 628 aa13.37□□□□□ -0.27
RPP40-204ENST00000468105 FADS2P1A8MWK0 482 aa13.37□□□□□ -0.27
RPP40-204ENST00000468105 CREG1O75629 220 aa13.37□□□□□ -0.27
RPP40-204ENST00000468105 PGLSO95336 258 aa13.37□□□□□ -0.27
RPP40-204ENST00000468105 C9P02748 559 aa13.37□□□□□ -0.27
RPP40-204ENST00000468105 TYRP1P17643 537 aa13.37□□□□□ -0.27
RPP40-204ENST00000468105 PPP1CAP62136 330 aa13.37□□□□□ -0.27
RPP40-204ENST00000468105 UBE2IP63279 158 aaKnown RBP13.37□□□□□ -0.27
RPP40-204ENST00000468105 MC1RQ01726 317 aa13.37□□□□□ -0.27
RPP40-204ENST00000468105 FOXM1Q08050 763 aa13.37□□□□□ -0.27
RPP40-204ENST00000468105 SEMA5AQ13591 1074 aa13.37□□□□□ -0.27
RPP40-204ENST00000468105 LONRF2Q1L5Z9 754 aa13.37□□□□□ -0.27
RPP40-204ENST00000468105 FAM199XQ6PEV8 388 aaPredicted RBP13.37□□□□□ -0.27
RPP40-204ENST00000468105 RFX6Q8HWS3 928 aa13.37□□□□□ -0.27
RPP40-204ENST00000468105 APLFQ8IW19 511 aaPredicted RBP13.37□□□□□ -0.27
RPP40-204ENST00000468105 PQLC3Q8N755 202 aa13.37□□□□□ -0.27
RPP40-204ENST00000468105 TTC13Q8NBP0 860 aa13.37□□□□□ -0.27
RPP40-204ENST00000468105 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.37□□□□□ -0.27
RPP40-204ENST00000468105 CT55Q8WUE5 264 aa13.37□□□□□ -0.27
RPP40-204ENST00000468105 AP2M1Q96CW1 435 aa13.37□□□□□ -0.27
RPP40-204ENST00000468105 C19orf60Q96EN9 201 aa13.37□□□□□ -0.27
RPP40-204ENST00000468105 CAPZA3Q96KX2 299 aa13.37□□□□□ -0.27
RPP40-204ENST00000468105 C9orf72Q96LT7 481 aa13.37□□□□□ -0.27
RPP40-204ENST00000468105 PLEKHG4BQ96PX9 1271 aa13.37□□□□□ -0.27
RPP40-204ENST00000468105 OR6C1Q96RD1 312 aa13.37□□□□□ -0.27
RPP40-204ENST00000468105 NUDCD1Q96RS6 583 aa13.37□□□□□ -0.27
RPP40-204ENST00000468105 HERPUD2Q9BSE4 406 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms