RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 CDC42EP4Q9H3Q1 356 aaKnown RBP15.78■□□□□ 0.12
GPC1-207ENST00000466624 IL21RQ9HBE5 538 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 TM7SF3Q9NS93 570 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 IARS2Q9NSE4 1012 aaKnown RBP15.78■□□□□ 0.12
GPC1-207ENST00000466624 NSMCE4AQ9NXX6 385 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 NINJ2Q9NZG7 142 aa15.78■□□□□ 0.12
GPC1-207ENST00000466624 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.78■□□□□ 0.12
GPC1-207ENST00000466624 ZNF292O60281 2723 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 TCRBV9S1A1TA0A576 114 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 PRMT5O14744 637 aaPredicted RBP15.77■□□□□ 0.12
GPC1-207ENST00000466624 AQP9O43315 295 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 SGTAO43765 313 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 S1PR4O95977 384 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 MYBL2P10244 700 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 ERVK-10P10266 1014 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 CTSEP14091 401 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 DGKAP23743 735 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 STX2P32856 288 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 PHBP35232 272 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 SLC1A2P43004 574 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 LEPRP48357 1165 aaKnown RBP15.77■□□□□ 0.12
GPC1-207ENST00000466624 CLCNKAP51800 687 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 CTSCP53634 463 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 LIMK1P53667 647 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 PRRT3Q5FWE3 981 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 TEDDM1Q5T9Z0 273 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 TMEM220Q6QAJ8 160 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 DBX2Q6ZNG2 339 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 C11orf96Q7Z7L8 435 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 LDB1Q86U70 411 aaPredicted RBP15.77■□□□□ 0.12
GPC1-207ENST00000466624 TRAPPC5Q8IUR0 188 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 LPGAT1Q92604 370 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 CDKL2Q92772 493 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 CCDC97Q96F63 343 aaPredicted RBP15.77■□□□□ 0.12
GPC1-207ENST00000466624 FUT8Q9BYC5 575 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 GSDMCQ9BYG8 508 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 CLPBQ9H078 707 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 TMEM168Q9H0V1 697 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 P2RY12Q9H244 342 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 VPS37BQ9H9H4 285 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 ZFATQ9P243 1243 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.77■□□□□ 0.12
GPC1-207ENST00000466624 ZNHIT2Q9UHR6 403 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 FBXO5Q9UKT4 447 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 GPSM3Q9Y4H4 160 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 PCDHB1Q9Y5F3 818 aa15.77■□□□□ 0.12
GPC1-207ENST00000466624 PCYT1BQ9Y5K3 369 aaPredicted RBP15.77■□□□□ 0.12
GPC1-207ENST00000466624 V9GYY5 206 aaPredicted RBP15.77■□□□□ 0.12
GPC1-207ENST00000466624 LAMA1P25391 3075 aa15.76■□□□□ 0.11
GPC1-207ENST00000466624 COL5A1P20908 1838 aaPredicted RBP15.76■□□□□ 0.11
GPC1-207ENST00000466624 C17orf113A0A1B0GUU1 675 aa15.76■□□□□ 0.11
GPC1-207ENST00000466624 NEMP2A6NFY4 417 aa15.76■□□□□ 0.11
GPC1-207ENST00000466624 OR2AG2A6NM03 316 aa15.76■□□□□ 0.11
GPC1-207ENST00000466624 OR1I1O60431 355 aa15.76■□□□□ 0.11
GPC1-207ENST00000466624 C1QAP02745 245 aa15.76■□□□□ 0.11
GPC1-207ENST00000466624 OR56A5P0C7T3 313 aa15.76■□□□□ 0.11
GPC1-207ENST00000466624 VSNL1P62760 191 aa15.76■□□□□ 0.11
GPC1-207ENST00000466624 DMPKQ09013 629 aa15.76■□□□□ 0.11
GPC1-207ENST00000466624 ILF2Q12905 390 aaKnown RBP15.76■□□□□ 0.11
GPC1-207ENST00000466624 ILF3Q12906 894 aaKnown RBP eCLIP15.76■□□□□ 0.11
GPC1-207ENST00000466624 BNIP3Q12983 259 aa15.76■□□□□ 0.11
GPC1-207ENST00000466624 CTBP1Q13363 440 aa15.76■□□□□ 0.11
GPC1-207ENST00000466624 SUZ12Q15022 739 aaKnown RBP15.76■□□□□ 0.11
GPC1-207ENST00000466624 KYNUQ16719 465 aa15.76■□□□□ 0.11
GPC1-207ENST00000466624 LVRNQ6Q4G3 990 aa15.76■□□□□ 0.11
GPC1-207ENST00000466624 TRMT10CQ7L0Y3 403 aaKnown RBP15.76■□□□□ 0.11
GPC1-207ENST00000466624 SLC26A11Q86WA9 606 aa15.76■□□□□ 0.11
GPC1-207ENST00000466624 GKN2Q86XP6 184 aa15.76■□□□□ 0.11
GPC1-207ENST00000466624 DENND6AQ8IWF6 608 aa15.76■□□□□ 0.11
GPC1-207ENST00000466624 OR2I1PQ8NGU4 316 aa15.76■□□□□ 0.11
GPC1-207ENST00000466624 LMX1AQ8TE12 382 aa15.76■□□□□ 0.11
GPC1-207ENST00000466624 SGF29Q96ES7 293 aa15.76■□□□□ 0.11
GPC1-207ENST00000466624 TXLNGYQ9BZA5 131 aa15.76■□□□□ 0.11
GPC1-207ENST00000466624 PPANQ9NQ55 473 aaKnown RBP15.76■□□□□ 0.11
GPC1-207ENST00000466624 RXFP3Q9NSD7 469 aa15.76■□□□□ 0.11
GPC1-207ENST00000466624 RAB21Q9UL25 225 aa15.76■□□□□ 0.11
GPC1-207ENST00000466624 GVINP1Q7Z2Y8 2422 aa15.76■□□□□ 0.11
GPC1-207ENST00000466624 ARHGEF17Q96PE2 2063 aaPredicted RBP15.75■□□□□ 0.11
GPC1-207ENST00000466624 ARID1BQ8NFD5 2236 aaPredicted RBP15.75■□□□□ 0.11
GPC1-207ENST00000466624 PRR19A6NJB7 356 aa15.75■□□□□ 0.11
GPC1-207ENST00000466624 FAM159BA6NKW6 160 aa15.75■□□□□ 0.11
GPC1-207ENST00000466624 LMO7DNF2Z398 122 aa15.75■□□□□ 0.11
GPC1-207ENST00000466624 H3BMM5 538 aa15.75■□□□□ 0.11
GPC1-207ENST00000466624 TPP1O14773 563 aa15.75■□□□□ 0.11
GPC1-207ENST00000466624 SCAMP1O15126 338 aa15.75■□□□□ 0.11
GPC1-207ENST00000466624 FTH1P02794 183 aa15.75■□□□□ 0.11
GPC1-207ENST00000466624 ESR1P03372 595 aa15.75■□□□□ 0.11
GPC1-207ENST00000466624 FAM153BP0C7A2 387 aa15.75■□□□□ 0.11
GPC1-207ENST00000466624 VCLP18206 1134 aa15.75■□□□□ 0.11
GPC1-207ENST00000466624 CTBSQ01459 385 aa15.75■□□□□ 0.11
GPC1-207ENST00000466624 NAB1Q13506 487 aa15.75■□□□□ 0.11
GPC1-207ENST00000466624 SMAD1Q15797 465 aaKnown RBP15.75■□□□□ 0.11
GPC1-207ENST00000466624 FAM153CQ494X1 144 aa15.75■□□□□ 0.11
GPC1-207ENST00000466624 CRTC3Q6UUV7 619 aa15.75■□□□□ 0.11
GPC1-207ENST00000466624 CAPN12Q6ZSI9 719 aa15.75■□□□□ 0.11
GPC1-207ENST00000466624 DET1Q7L5Y6 550 aa15.75■□□□□ 0.11
GPC1-207ENST00000466624 CHST15Q7LFX5 561 aaPredicted RBP15.75■□□□□ 0.11
GPC1-207ENST00000466624 NRROSQ86YC3 692 aa15.75■□□□□ 0.11
GPC1-207ENST00000466624 GSPT2Q8IYD1 628 aaKnown RBP15.75■□□□□ 0.11
GPC1-207ENST00000466624 SLC25A45Q8N413 288 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms