RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 MAP7Q14244 749 aa16.17■□□□□ 0.18
SLX4-202ENST00000466154 BLOC1S3Q6QNY0 202 aa16.17■□□□□ 0.18
SLX4-202ENST00000466154 CLHC1Q8NHS4 586 aa16.17■□□□□ 0.18
SLX4-202ENST00000466154 DGCR14Q96DF8 476 aaKnown RBP16.17■□□□□ 0.18
SLX4-202ENST00000466154 TCF12Q99081 682 aa16.17■□□□□ 0.18
SLX4-202ENST00000466154 TRIM15Q9C019 465 aa16.17■□□□□ 0.18
SLX4-202ENST00000466154 ZNHIT2Q9UHR6 403 aa16.17■□□□□ 0.18
SLX4-202ENST00000466154 GPR45Q9Y5Y3 372 aa16.17■□□□□ 0.18
SLX4-202ENST00000466154 BBIP1A8MTZ0 92 aa16.16■□□□□ 0.18
SLX4-202ENST00000466154 SMAD6O43541 496 aaKnown RBP16.16■□□□□ 0.18
SLX4-202ENST00000466154 FASP25445 335 aa16.16■□□□□ 0.18
SLX4-202ENST00000466154 CXorf57Q6NSI4 855 aaKnown RBP16.16■□□□□ 0.18
SLX4-202ENST00000466154 AHI1Q8N157 1196 aa16.16■□□□□ 0.18
SLX4-202ENST00000466154 MAGEE2Q8TD90 523 aaPredicted RBP16.16■□□□□ 0.18
SLX4-202ENST00000466154 SARDHQ9UL12 918 aa16.16■□□□□ 0.18
SLX4-202ENST00000466154 OAS3Q9Y6K5 1087 aaKnown RBP16.16■□□□□ 0.18
SLX4-202ENST00000466154 hCG_2014768A0A024R1R8 64 aa16.16■□□□□ 0.18
SLX4-202ENST00000466154 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.16■□□□□ 0.18
SLX4-202ENST00000466154 MLYCDO95822 493 aa16.16■□□□□ 0.18
SLX4-202ENST00000466154 RPS17P08708 135 aaKnown RBP16.16■□□□□ 0.18
SLX4-202ENST00000466154 G6PDP11413 515 aa16.16■□□□□ 0.18
SLX4-202ENST00000466154 SLC2A4P14672 509 aa16.16■□□□□ 0.18
SLX4-202ENST00000466154 CR2P20023 1033 aa16.16■□□□□ 0.18
SLX4-202ENST00000466154 CA5AP35218 305 aa16.16■□□□□ 0.18
SLX4-202ENST00000466154 MBOAT1Q6ZNC8 495 aa16.16■□□□□ 0.18
SLX4-202ENST00000466154 CMTR2Q8IYT2 770 aaKnown RBP16.16■□□□□ 0.18
SLX4-202ENST00000466154 RIN3Q8TB24 985 aa16.16■□□□□ 0.18
SLX4-202ENST00000466154 RMND5BQ96G75 393 aaPredicted RBP16.16■□□□□ 0.18
SLX4-202ENST00000466154 C17orf80Q9BSJ5 609 aa16.16■□□□□ 0.18
SLX4-202ENST00000466154 VPS51Q9UID3 782 aa16.16■□□□□ 0.18
SLX4-202ENST00000466154 CROCCQ5TZA2 2017 aa16.16■□□□□ 0.18
SLX4-202ENST00000466154 SMIM31A0A1B0GVY4 71 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 CLDN7O95471 211 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 TSPAN12O95859 305 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 ZNF23P17027 643 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 GJA1P17302 382 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 NFKBIAP25963 317 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 IL12AP29459 219 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 HMGCS1Q01581 520 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 BFSP2Q13515 415 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 ZIK1Q3SY52 487 aaPredicted RBP16.15■□□□□ 0.18
SLX4-202ENST00000466154 C6orf136Q5SQH8 315 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 ARMC12Q5T9G4 340 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 SERPINA9Q86WD7 417 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 APCDD1Q8J025 514 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 OR4F6Q8NGB9 312 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 EID2BQ96D98 161 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 OSBPL11Q9BXB4 747 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 POPDC3Q9HBV1 291 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 ZNF711Q9Y462 761 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 ARIH1Q9Y4X5 557 aaPredicted RBP16.15■□□□□ 0.18
SLX4-202ENST00000466154 COMMD3-BMI1R4GMX3 469 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 TYW5A2RUC4 315 aaKnown RBP16.15■□□□□ 0.18
SLX4-202ENST00000466154 VILLO15195 856 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 RPL38P63173 70 aaKnown RBP16.15■□□□□ 0.18
SLX4-202ENST00000466154 TTC33Q6PID6 262 aaPredicted RBP16.15■□□□□ 0.18
SLX4-202ENST00000466154 ERMP1Q7Z2K6 904 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 PEX13Q92968 403 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 FBXL20Q96IG2 436 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 CLSTN3Q9BQT9 956 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 IPPKQ9H8X2 491 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 RIC8BQ9NVN3 520 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 HEMK1Q9Y5R4 338 aaPredicted RBP16.15■□□□□ 0.18
SLX4-202ENST00000466154 PATJQ8NI35 1801 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 A0A1W2PP18 115 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 E2F3O00716 465 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 EI24O14681 340 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 SLC25A14O95258 325 aaPredicted RBP16.15■□□□□ 0.18
SLX4-202ENST00000466154 PENKP01210 267 aaPredicted RBP16.15■□□□□ 0.18
SLX4-202ENST00000466154 HMGA1P17096 107 aaKnown RBP16.15■□□□□ 0.18
SLX4-202ENST00000466154 ATP4BP51164 291 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 VEPH1Q14D04 833 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 PLCL1Q15111 1095 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 FAM126BQ8IXS8 530 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 LKAAEAR1Q8TD35 194 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.15■□□□□ 0.181e-7■■■■■ 35.3
SLX4-202ENST00000466154 CDK5RAP1Q96SZ6 601 aaKnown RBP16.15■□□□□ 0.18
SLX4-202ENST00000466154 FARSBQ9NSD9 589 aaKnown RBP16.15■□□□□ 0.18
SLX4-202ENST00000466154 CRLS1Q9UJA2 301 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 MYRFQ9Y2G1 1151 aa16.15■□□□□ 0.18
SLX4-202ENST00000466154 ASPDHA6ND91 283 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 PRMT5O14744 637 aaPredicted RBP16.14■□□□□ 0.17
SLX4-202ENST00000466154 CD160O95971 181 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 PPP1R8Q12972 351 aaKnown RBP16.14■□□□□ 0.17
SLX4-202ENST00000466154 AP5B1Q2VPB7 878 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 MILR1Q7Z6M3 343 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 TMEM126BQ8IUX1 230 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 STON2Q8WXE9 905 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 TOP1MTQ969P6 601 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 ZNF597Q96LX8 424 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 GPATCH1Q9BRR8 931 aaKnown RBP16.14■□□□□ 0.17
SLX4-202ENST00000466154 FEM1AQ9BSK4 669 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 TBCDQ9BTW9 1192 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 AIG1Q9NVV5 245 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 WWOXQ9NZC7 414 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 KLQ9UEF7 1012 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 VPS9D1Q9Y2B5 631 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 YIPF1Q9Y548 306 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 CKMP06732 381 aa16.14■□□□□ 0.17
SLX4-202ENST00000466154 CYP4F8P98187 520 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms