RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 TMEM196Q5HYL7 178 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 SIRPB2Q5JXA9 342 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 CERCAMQ5T4B2 595 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 TSTD2Q5T7W7 516 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 ARMC12Q5T9G4 340 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 LGSNQ5TDP6 509 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 ZDHHC20Q5W0Z9 365 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 KIAA0930Q6ICG6 404 aaPredicted RBP5.48□□□□□ -1.53
VPS41-211ENST00000466017 BRAT1Q6PJG6 821 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 PAQR3Q6TCH7 311 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 LINGO4Q6UY18 593 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 TIFABQ6ZNK6 161 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 EP400NLQ6ZTU2 488 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 KIAA0408Q6ZU52 694 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 MARK2Q7KZI7 788 aaKnown RBP5.48□□□□□ -1.53
VPS41-211ENST00000466017 SLC26A11Q86WA9 606 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 LRRC6Q86X45 466 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 FAM129CQ86XR2 697 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 CNTN4Q8IWV2 1026 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 MPP5Q8N3R9 675 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 GPR150Q8NGU9 434 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 CALML6Q8TD86 181 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 SLC44A1Q8WWI5 657 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 CDKL2Q92772 493 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 DACT3Q96B18 629 aaPredicted RBP5.48□□□□□ -1.53
VPS41-211ENST00000466017 ZFYVE19Q96K21 471 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 RPL10LQ96L21 214 aaKnown RBP5.48□□□□□ -1.53
VPS41-211ENST00000466017 MCCC1Q96RQ3 725 aaPredicted RBP5.48□□□□□ -1.53
VPS41-211ENST00000466017 RUFY1Q96T51 708 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 P2RY13Q9BPV8 354 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 STMN4Q9H169 189 aaPredicted RBP5.48□□□□□ -1.53
VPS41-211ENST00000466017 CHRAC1Q9NRG0 131 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 GTSE1Q9NYZ3 720 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.48□□□□□ -1.53
VPS41-211ENST00000466017 HECAQ9UBI9 543 aaPredicted RBP5.48□□□□□ -1.53
VPS41-211ENST00000466017 EVLQ9UI08 416 aaPredicted RBP5.48□□□□□ -1.53
VPS41-211ENST00000466017 CNOT6Q9ULM6 557 aaKnown RBP5.48□□□□□ -1.53
VPS41-211ENST00000466017 CHMP2BQ9UQN3 213 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 CHKBQ9Y259 395 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 TTLL3Q9Y4R7 772 aa5.48□□□□□ -1.53
VPS41-211ENST00000466017 TBC1D3BA6NDS4 549 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 GOLGA6L10A6NI86 522 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 C2orf81A6NN90 581 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 A6NNZ2 444 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 AGAP14A8MT82 685 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 HMGB1P1B2RPK0 211 aaPredicted RBP5.47□□□□□ -1.53
VPS41-211ENST00000466017 SPECC1L-ADORA2AF8WAN1 911 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 H3BQ06 376 aaPredicted RBP5.47□□□□□ -1.53
VPS41-211ENST00000466017 K7EQS6 105 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 HRKO00198 91 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 PSMD11O00231 422 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 TRIM24O15164 1050 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 NUAK1O60285 661 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 DLX3O60479 287 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 USP12O75317 370 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 ACSL3O95573 720 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 PLA2G1BP04054 148 aaKnown RBP5.47□□□□□ -1.53
VPS41-211ENST00000466017 SHBGP04278 402 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 SCG5P05408 212 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 PDHA1P08559 390 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 MYZAPP0CAP1 466 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 FOSL2P15408 326 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 ZNF30P17039 623 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 TPH1P17752 444 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 LPOP22079 712 aaPredicted RBP5.47□□□□□ -1.53
VPS41-211ENST00000466017 GCAP28676 217 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 HMGCLP35914 325 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 BCL6P41182 706 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 CCNHP51946 323 aaPredicted RBP5.47□□□□□ -1.53
VPS41-211ENST00000466017 SLC18A1P54219 525 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 CSE1LP55060 971 aaKnown RBP5.47□□□□□ -1.53
VPS41-211ENST00000466017 CREB5Q02930 508 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 IFFO1Q0D2I5 559 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 CCDC15Q0P6D6 951 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 TDGQ13569 410 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 ELAVL3Q14576 367 aaKnown RBP5.47□□□□□ -1.53
VPS41-211ENST00000466017 ZNF234Q14588 700 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 CRYMQ14894 314 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 LONRF1Q17RB8 773 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 AAK1Q2M2I8 961 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 TUBB8Q3ZCM7 444 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 FBLN7Q53RD9 439 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 HSP90B2PQ58FF3 399 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 ZNF805Q5CZA5 627 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 CEP85LQ5SZL2 805 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 SLC35F1Q5T1Q4 408 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 C9orf64Q5T6V5 341 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 TEDDM1Q5T9Z0 273 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 GRTP1Q5TC63 336 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 PDPK2PQ6A1A2 396 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 ESRP1Q6NXG1 681 aaKnown RBP5.47□□□□□ -1.53
VPS41-211ENST00000466017 ZC3H14Q6PJT7 736 aaKnown RBP5.47□□□□□ -1.53
VPS41-211ENST00000466017 GDPD4Q6W3E5 623 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 LEKR1Q6ZMV7 388 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 DPY19L3Q6ZPD9 716 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 TPRG1Q6ZUI0 275 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 TRMT11Q7Z4G4 463 aaKnown RBP5.47□□□□□ -1.53
VPS41-211ENST00000466017 CAMK1DQ8IU85 385 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 SYNPOQ8N3V7 929 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 TTC30BQ8N4P2 665 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms