RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 MBNL1Q9NR56 388 aaKnown RBP9.38□□□□□ -0.91
ATG3-203ENST00000465980 FRRS1LQ9P0K9 344 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 DKK3Q9UBP4 350 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 DKK4Q9UBT3 224 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 APOBEC3BQ9UH17 382 aaKnown RBP9.38□□□□□ -0.91
ATG3-203ENST00000465980 CLCA2Q9UQC9 943 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 TTLL3Q9Y4R7 772 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 PCDHB1Q9Y5F3 818 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 U3KQA8 63 aa9.38□□□□□ -0.91
ATG3-203ENST00000465980 AP3B1O00203 1094 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 MAP2K7O14733 419 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 MUSKO15146 869 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 OPA1O60313 960 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 BRINP1O60477 761 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 MT-CO3P00414 261 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 PCCBP05166 539 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 CKMT1AP12532 417 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 C6P13671 934 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 EPB42P16452 691 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 CR2P20023 1033 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 ITPKBP27987 946 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 HSD17B3P37058 310 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 MAGEA3P43357 314 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 MAXP61244 160 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 ITKQ08881 620 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 NSUN2Q08J23 767 aaKnown RBP eCLIP9.37□□□□□ -0.91
ATG3-203ENST00000465980 NIPAL4Q0D2K0 466 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 ELP6Q0PNE2 266 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 PDIA2Q13087 525 aaKnown RBP9.37□□□□□ -0.91
ATG3-203ENST00000465980 MPP3Q13368 585 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 SLC14A2Q15849 920 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 UAP1Q16222 522 aaPredicted RBP9.37□□□□□ -0.91
ATG3-203ENST00000465980 GUSBP11Q6P575 273 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 KDELC1Q6UW63 502 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 SRLQ86TD4 932 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 PDZD3Q86UT5 571 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 CAND1Q86VP6 1230 aaKnown RBP9.37□□□□□ -0.91
ATG3-203ENST00000465980 PHACTR4Q8IZ21 702 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 TP53I13Q8NBR0 393 aaPredicted RBP9.37□□□□□ -0.91
ATG3-203ENST00000465980 SPATA22Q8NHS9 363 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 IFI44Q8TCB0 444 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 MAPK15Q8TD08 544 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 SCG3Q8WXD2 468 aaKnown RBP9.37□□□□□ -0.91
ATG3-203ENST00000465980 ASB12Q8WXK4 309 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 CENPTQ96BT3 561 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 LRRC39Q96DD0 335 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 MGME1Q9BQP7 344 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 CPEB1Q9BZB8 566 aaKnown RBP9.37□□□□□ -0.91
ATG3-203ENST00000465980 CDC42EP4Q9H3Q1 356 aaKnown RBP9.37□□□□□ -0.91
ATG3-203ENST00000465980 ATP13A3Q9H7F0 1226 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 SYNDIG1Q9H7V2 258 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 SAYSD1Q9NPB0 183 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 NINJ2Q9NZG7 142 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 PNMA8BQ9ULN7 279 aaPredicted RBP9.37□□□□□ -0.91
ATG3-203ENST00000465980 SCN8AQ9UQD0 1980 aa9.37□□□□□ -0.91
ATG3-203ENST00000465980 A8MX80 341 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 CASC3O15234 703 aaKnown RBP9.36□□□□□ -0.91
ATG3-203ENST00000465980 RIPK2O43353 540 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 TLX3O43711 291 aaPredicted RBP9.36□□□□□ -0.91
ATG3-203ENST00000465980 AVILO75366 819 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 SASH3O75995 380 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 TTC4O95801 387 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 MT-CYBP00156 380 aaPredicted RBP9.36□□□□□ -0.91
ATG3-203ENST00000465980 MMP2P08253 660 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 TSHRP16473 764 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 SERPINA4P29622 427 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 ADRA1AP35348 466 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 MMP12P39900 470 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 GRIA1P42261 906 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 LIG3P49916 1009 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 DUSP3P51452 185 aaPredicted RBP9.36□□□□□ -0.91
ATG3-203ENST00000465980 E2F1Q01094 437 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 DSC2Q02487 901 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 SPARCL1Q14515 664 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 LRRC14Q15048 493 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 KYNUQ16719 465 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 UGP2Q16851 508 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 WSCD2Q2TBF2 565 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 BBS9Q3SYG4 887 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 TMEM52BQ4KMG9 183 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 DNAJC21Q5F1R6 531 aaKnown RBP9.36□□□□□ -0.91
ATG3-203ENST00000465980 RALGPS1Q5JS13 557 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 ALS2CLQ60I27 953 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 ZCCHC8Q6NZY4 707 aaKnown RBP9.36□□□□□ -0.91
ATG3-203ENST00000465980 ERAP2Q6P179 960 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 MACC1Q6ZN28 852 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 EFL1Q7Z2Z2 1120 aaKnown RBP9.36□□□□□ -0.91
ATG3-203ENST00000465980 RD3Q7Z3Z2 195 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 LINC00523Q86TU6 105 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 HID1Q8IV36 788 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 ZBED8Q8IZ13 594 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 IQCKQ8N0W5 287 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 DCBLD1Q8N8Z6 715 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 UBLCP1Q8WVY7 318 aaPredicted RBP9.36□□□□□ -0.91
ATG3-203ENST00000465980 TSACCQ96A04 125 aaPredicted RBP9.36□□□□□ -0.91
ATG3-203ENST00000465980 SIGLEC10Q96LC7 697 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 TTC25Q96NG3 672 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 NUDCD1Q96RS6 583 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 SEMA3CQ99985 751 aa9.36□□□□□ -0.91
ATG3-203ENST00000465980 LRRC61Q9BV99 259 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms