RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 TMCC1O94876 653 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 KLKB1P03952 638 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 NCK1P16333 377 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 TM4SF4P48230 202 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 PRKG2Q13237 762 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 C6orf136Q5SQH8 315 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 LINGO4Q6UY18 593 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 TAS1R1Q7RTX1 841 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 STK40Q8N2I9 435 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 ZNF786Q8N393 782 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 DBF4BQ8NFT6 615 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 OR52B6Q8NGF0 335 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 C8orf4Q9NR00 106 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 GKN1Q9NS71 199 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 ASB1Q9Y576 335 aa18.12■□□□□ 0.49
SYNE4-204ENST00000465425 FAM234BA2RU67 622 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 GOLGA8CPA6NN73 597 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 STC2O76061 302 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 C1RP00736 705 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 F11P03951 625 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 ZFP36L2P47974 494 aaKnown RBP18.11■□□□□ 0.49
SYNE4-204ENST00000465425 TUFMP49411 452 aaKnown RBP18.11■□□□□ 0.49
SYNE4-204ENST00000465425 ADARP55265 1226 aaKnown RBP18.11■□□□□ 0.49
SYNE4-204ENST00000465425 TRAF2Q12933 501 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 TMEM173Q86WV6 379 aaPredicted RBP18.11■□□□□ 0.49
SYNE4-204ENST00000465425 KIAA2013Q8IYS2 634 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 TNIP2Q8NFZ5 429 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 METTL6Q8TCB7 284 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 GRIN3AQ8TCU5 1115 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 TMEM74Q96NL1 305 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 STARD7Q9NQZ5 370 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 NUDT4Q9NZJ9 180 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 SLAMF8Q9P0V8 285 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 ANAPC2Q9UJX6 822 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 SLC30A1Q9Y6M5 507 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 IQCF5A8MTL0 148 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 H7C0S8 307 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 TRMUO75648 421 aaKnown RBP18.11■□□□□ 0.49
SYNE4-204ENST00000465425 GNAO1P09471 354 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 UMPSP11172 480 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 EEFSECP57772 596 aaKnown RBP18.11■□□□□ 0.49
SYNE4-204ENST00000465425 PTPRRQ15256 657 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 ATP6AP1Q15904 470 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 ADGRF1Q5T601 910 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 NANOGP8Q6NSW7 305 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 CYGBQ8WWM9 190 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 OVCA2Q8WZ82 227 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 NANOGQ9H9S0 305 aa18.11■□□□□ 0.49
SYNE4-204ENST00000465425 TSR3Q9UJK0 312 aaKnown RBP18.11■□□□□ 0.49
SYNE4-204ENST00000465425 GBF1Q92538 1859 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 A0A0U1RQS6 177 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 RASAL1O95294 804 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 NPPAP01160 153 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 GALTP07902 379 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 SELPP16109 830 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 MYF6P23409 242 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 SLC5A2P31639 672 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 ALDH3B2P48448 385 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 ERVPABLB-1P60509 514 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 ARF5P84085 180 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 IL27RAQ6UWB1 636 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 LPCAT2Q7L5N7 544 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 TBC1D21Q8IYX1 336 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 PROKR1Q8TCW9 393 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 PLEKHG4BQ96PX9 1271 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 LRRC3Q9BY71 257 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 GPR63Q9BZJ6 419 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 CWH43Q9H720 699 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 INTS7Q9NVH2 962 aaKnown RBP18.1■□□□□ 0.49
SYNE4-204ENST00000465425 RNF186Q9NXI6 227 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 TNPO3Q9Y5L0 923 aaKnown RBP18.1■□□□□ 0.49
SYNE4-204ENST00000465425 A0A087WXM4 84 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 DLGAP1O14490 977 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 GPR39O43194 453 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 S100BP04271 92 aaPredicted RBP18.1■□□□□ 0.49
SYNE4-204ENST00000465425 ENO2P09104 434 aaPredicted RBP18.1■□□□□ 0.49
SYNE4-204ENST00000465425 C7P10643 843 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 RFC2P35250 354 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 CDH15P55291 814 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 KCTD21Q4G0X4 260 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 LETMD1Q6P1Q0 360 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 ARHGAP22Q7Z5H3 698 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 ADAMTSL2Q86TH1 951 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 TTC30BQ8N4P2 665 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 SEPT8Q92599 483 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 TMIGD2Q96BF3 282 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 PIF1Q9H611 641 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 TRPM5Q9NZQ8 1165 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 PCDHB9Q9Y5E1 797 aa18.1■□□□□ 0.49
SYNE4-204ENST00000465425 A0A1W2PQ45 241 aaPredicted RBP18.09■□□□□ 0.49
SYNE4-204ENST00000465425 A0A1W2PQY0 241 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 DYTNA2CJ06 578 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 EI24O14681 340 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 PRMT5O14744 637 aaPredicted RBP18.09■□□□□ 0.49
SYNE4-204ENST00000465425 ADAM12O43184 909 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 SNAP91O60641 907 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 SEC24DO94855 1032 aaPredicted RBP18.09■□□□□ 0.49
SYNE4-204ENST00000465425 CAPN1P07384 714 aa18.09■□□□□ 0.49
SYNE4-204ENST00000465425 RPL17P18621 184 aaKnown RBP18.09■□□□□ 0.49
SYNE4-204ENST00000465425 PCSK6P29122 969 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms