RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 CERS6Q6ZMG9 384 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 RAB44Q7Z6P3 723 aaPredicted RBP14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 AMZ2Q86W34 360 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 C17orf82Q86X59 251 aaPredicted RBP14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 NAGSQ8N159 534 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 CHCHD4Q8N4Q1 142 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 KIF18AQ8NI77 898 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 SNF8Q96H20 258 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 SIGLEC10Q96LC7 697 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 TTC1Q99614 292 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 TUBB2BQ9BVA1 445 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 OSGEPL1Q9H4B0 414 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 ANAPC5Q9UJX4 755 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 DNAJC16Q9Y2G8 782 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 FAM237BA0A1B0GVD1 139 aa14.28□□□□□ -0.12
SQSTM1-205ENST00000464493 RAD51CO43502 376 aa14.28□□□□□ -0.12
SQSTM1-205ENST00000464493 SEC31AO94979 1220 aaKnown RBP14.28□□□□□ -0.12
SQSTM1-205ENST00000464493 VAPBO95292 243 aa14.28□□□□□ -0.12
SQSTM1-205ENST00000464493 EML2O95834 649 aa14.28□□□□□ -0.12
SQSTM1-205ENST00000464493 GLB1P16278 677 aa14.28□□□□□ -0.12
SQSTM1-205ENST00000464493 PPARGP37231 505 aaPredicted RBP14.28□□□□□ -0.12
SQSTM1-205ENST00000464493 ITGA8P53708 1063 aa14.28□□□□□ -0.12
SQSTM1-205ENST00000464493 ITIH4Q14624 930 aa14.28□□□□□ -0.12
SQSTM1-205ENST00000464493 BCL7AQ4VC05 210 aa14.28□□□□□ -0.12
SQSTM1-205ENST00000464493 PERM1Q5SV97 790 aa14.28□□□□□ -0.12
SQSTM1-205ENST00000464493 HIBCHQ6NVY1 386 aaPredicted RBP14.28□□□□□ -0.12
SQSTM1-205ENST00000464493 IYDQ6PHW0 289 aa14.28□□□□□ -0.12
SQSTM1-205ENST00000464493 ARL14Q8N4G2 192 aa14.28□□□□□ -0.12
SQSTM1-205ENST00000464493 BEND7Q8N7W2 519 aaPredicted RBP14.28□□□□□ -0.12
SQSTM1-205ENST00000464493 NAT14Q8WUY8 206 aa14.28□□□□□ -0.12
SQSTM1-205ENST00000464493 PATE1Q8WXA2 126 aa14.28□□□□□ -0.12
SQSTM1-205ENST00000464493 CCDC97Q96F63 343 aaPredicted RBP14.28□□□□□ -0.12
SQSTM1-205ENST00000464493 ERP44Q9BS26 406 aa14.28□□□□□ -0.12
SQSTM1-205ENST00000464493 ABCG4Q9H172 646 aa14.28□□□□□ -0.12
SQSTM1-205ENST00000464493 PRDM8Q9NQV8 689 aa14.28□□□□□ -0.12
SQSTM1-205ENST00000464493 CATSPERZQ9NTU4 200 aa14.28□□□□□ -0.12
SQSTM1-205ENST00000464493 SNX24Q9Y343 169 aa14.28□□□□□ -0.12
SQSTM1-205ENST00000464493 RP1P56715 2156 aa14.27□□□□□ -0.12
SQSTM1-205ENST00000464493 TRBV23OR9-2A0A075B6M9 112 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 KLHL33A6NCF5 533 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 OR5K4A6NMS3 321 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 NDC80O14777 642 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 CD3EAPO15446 510 aaKnown RBP14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 SGTAO43765 313 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 NUDT21O43809 227 aaKnown RBP14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 F3P13726 295 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 SLC2A4P14672 509 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 PAMP19021 973 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 IDSP22304 550 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 PMLP29590 882 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 PBLDP30039 288 aaPredicted RBP14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 NSG1P42857 185 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 RPL21P46778 160 aaKnown RBP14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 MAZP56270 477 aaKnown RBP14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 DMPKQ09013 629 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 BIRC2Q13490 618 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 SMAD1Q15797 465 aaKnown RBP14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 ANKRD20A4Q4UJ75 823 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 DNAJC21Q5F1R6 531 aaKnown RBP14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 AARS2Q5JTZ9 985 aaKnown RBP14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 TMEM135Q86UB9 458 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 AGGF1Q8N302 714 aaeCLIP14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 SFRP1Q8N474 314 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 CLDN19Q8N6F1 224 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 BBOF1Q8ND07 529 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 MAPK15Q8TD08 544 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 CCDC74AQ96AQ1 378 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 LINC00615Q96LM1 132 aaPredicted RBP14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 CCDC3Q9BQI4 270 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 LRIT1Q9P2V4 623 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 MRFAP1Q9Y605 127 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 MAD1L1Q9Y6D9 718 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 RPS6KL1Q9Y6S9 549 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 RNF215Q9Y6U7 377 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 NCOR2Q9Y618 2525 aa14.27□□□□□ -0.13
SQSTM1-205ENST00000464493 A6NCN8 305 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 MGAT4DA6NG13 374 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 PRR19A6NJB7 356 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 RHPN2P1A8MT19 583 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 PDZK1P1A8MUH7 402 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 HYAL3O43820 417 aaPredicted RBP14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 OPA1O60313 960 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 USP1O94782 785 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 AP2A2O94973 939 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 TOP3BO95985 862 aaKnown RBP14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 PNLIPP16233 465 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 ARNTP27540 789 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 RPL10P27635 214 aaKnown RBP14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 ARCN1P48444 511 aaKnown RBP14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 TTPAP49638 278 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 PRLHRP49683 370 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 INSM1Q01101 510 aaPredicted RBP14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 FOXK2Q01167 660 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 DHX9Q08211 1270 aaKnown RBP14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 SEMA3AQ14563 771 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 SEPT7Q16181 437 aaKnown RBP14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 MSS51Q4VC12 460 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 KIAA0930Q6ICG6 404 aaPredicted RBP14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 WASH2PQ6VEQ5 465 aa14.26□□□□□ -0.13
SQSTM1-205ENST00000464493 PACS1Q6VY07 963 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms