RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 TRIM38O00635 465 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 CDK14O94921 469 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 SNRPB2P08579 225 aaKnown RBP11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 PRSS56P0CW18 603 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 TCF3P15923 654 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 TSPAN8P19075 237 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 CD9P21926 228 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 PEX2P28328 305 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 TTPAP49638 278 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 CDH13P55290 713 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 PSME3P61289 254 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 SH3BP2P78314 561 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 ARF5P84085 180 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 PDGFRLQ15198 375 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 MLF2Q15773 248 aaPredicted RBP11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 LRRC36Q1X8D7 754 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 ITPRIPL2Q3MIP1 535 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 LPCAT4Q643R3 524 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 PAQR3Q6TCH7 311 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 CYHR1Q6ZMK1 362 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 TPGS1Q6ZTW0 290 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 HTR3DQ70Z44 454 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 TMEM126BQ8IUX1 230 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 NKAPQ8N5F7 415 aaKnown RBP11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 HMGCLL1Q8TB92 370 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 DNASE1L2Q92874 299 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 SPDL1Q96EA4 605 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 FOXQ1Q9C009 403 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 MID1IP1Q9NPA3 183 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 CACNA2D2Q9NY47 1150 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 CCDC167Q9P0B6 97 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 DLGAP2Q9P1A6 1054 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 SARDHQ9UL12 918 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 RNF112Q9ULX5 631 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 MED16Q9Y2X0 877 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 PCDHGA7Q9Y5G6 932 aa11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 OAS3Q9Y6K5 1087 aaKnown RBP11.98□□□□□ -0.49
SEC61A1-203ENST00000464451 AZIN1O14977 448 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 TMCC1O94876 653 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 SIX3O95343 332 aaPredicted RBP11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 LATS1O95835 1130 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 RPL26P61254 145 aaKnown RBP11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 STX1BP61266 288 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 MS4A2Q01362 244 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 LRP8Q14114 963 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 PTPRNQ16849 979 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 SETMARQ53H47 684 aaPredicted RBP11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 INO80DQ53TQ3 878 aaPredicted RBP11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 LY6G5CQ5SRR4 150 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 OGFRL1Q5TC84 451 aaPredicted RBP11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 KANK2Q63ZY3 851 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 REP15Q6BDI9 236 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 TXNDC11Q6PKC3 985 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 TMEM25Q86YD3 366 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 FBXO39Q8N4B4 442 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 BHLHE22Q8NFJ8 381 aaPredicted RBP11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 PBXIP1Q96AQ6 731 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 BIRC8Q96P09 236 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 SPATS2LQ9NUQ6 558 aaKnown RBP11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 ADA2Q9NZK5 511 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 NDRG2Q9UN36 371 aaKnown RBP11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 DNAJC15Q9Y5T4 150 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 SHISA7A6NL88 538 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 SUPT3HB4E1H0 165 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 STX16-NPEPL1H3BU86 382 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 ACOT8O14734 319 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 STX7O15400 261 aaKnown RBP11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 KIF1CO43896 1103 aaKnown RBP11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 VPS26AO75436 327 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 SUPT3HO75486 399 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 CYP17A1P05093 508 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 PKMP14618 531 aaKnown RBP11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 MC4RP32245 332 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 LCP2Q13094 533 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 DHCR24Q15392 516 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 GEN1Q17RS7 908 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 SFT2D3Q587I9 215 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 AARS2Q5JTZ9 985 aaKnown RBP11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 NCEH1Q6PIU2 408 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 HACD2Q6Y1H2 254 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 Q6ZNB5 142 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 CPA6Q8N4T0 437 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 RNF148Q8N7C7 305 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 NAT16Q8N8M0 369 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 TWIST2Q8WVJ9 160 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 ASB9Q96DX5 294 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 CHFRQ96EP1 664 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 LRGUKQ96M69 825 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 GPR21Q99679 349 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 AKTIPQ9H8T0 292 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 TBC1D17Q9HA65 648 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 SPAG4Q9NPE6 437 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 PLK2Q9NYY3 685 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 TBC1D14Q9P2M4 693 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 SUCOQ9UBS9 1254 aaKnown RBP11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 COMMD10Q9Y6G5 202 aa11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 KIF26AQ9ULI4 1882 aaPredicted RBP11.97□□□□□ -0.49
SEC61A1-203ENST00000464451 NCOR1O75376 2440 aa11.96□□□□□ -0.49
SEC61A1-203ENST00000464451 COL4A2P08572 1712 aa11.96□□□□□ -0.49
SEC61A1-203ENST00000464451 ATP6AP2A0A1C7CYW4 349 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms