RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 BRSK1Q8TDC3 778 aa8.99□□□□□ -0.97
HPS4-208ENST00000464362 YIPF2Q9BWQ6 316 aa8.99□□□□□ -0.97
HPS4-208ENST00000464362 TMCO1Q9UM00 188 aa8.99□□□□□ -0.97
HPS4-208ENST00000464362 COL16A1Q07092 1604 aaPredicted RBP8.99□□□□□ -0.97
HPS4-208ENST00000464362 COL22A1Q8NFW1 1626 aaPredicted RBP8.98□□□□□ -0.97
HPS4-208ENST00000464362 A0A0U1RQS6 177 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 EFCAB10A6NFE3 127 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 MANSC4A6NHS7 340 aaPredicted RBP8.98□□□□□ -0.97
HPS4-208ENST00000464362 SDHDO14521 159 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 ECI2O75521 394 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 HAPLN1P10915 354 aaPredicted RBP8.98□□□□□ -0.97
HPS4-208ENST00000464362 AZGP1P25311 298 aaKnown RBP8.98□□□□□ -0.97
HPS4-208ENST00000464362 RPIAP49247 311 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 MLLT6P55198 1093 aaPredicted RBP8.98□□□□□ -0.97
HPS4-208ENST00000464362 CLDN10P78369 228 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 NCF4Q15080 339 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 SYT16Q17RD7 645 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 ZNF789Q5FWF6 425 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 ARMCX4Q5H9R4 360 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 CASP12Q6UXS9 341 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 USP45Q70EL2 814 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 LIX1Q8N485 282 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 SLC45A3Q96JT2 553 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 C16orf70Q9BSU1 422 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 CXCL16Q9H2A7 254 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 ATP13A3Q9H7F0 1226 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 DNAJB4Q9UDY4 337 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 RAPGEFL1Q9UHV5 662 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 VPS4AQ9UN37 437 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 DOT1LQ8TEK3 1739 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 ASNA1O43681 348 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 SNAI1O95863 264 aaPredicted RBP8.98□□□□□ -0.97
HPS4-208ENST00000464362 ARSAP15289 507 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 IGFBP5P24593 272 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 GABRR2P28476 465 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 KIR3DL1P43629 444 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 ENTPD1P49961 510 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 HERVK_113P63132 956 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 SPIBQ01892 262 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 GALNT2Q10471 571 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 NAE1Q13564 534 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 IKBKEQ14164 716 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 SETMARQ53H47 684 aaPredicted RBP8.98□□□□□ -0.97
HPS4-208ENST00000464362 TXNDC11Q6PKC3 985 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 VN1R5Q7Z5H4 357 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 SERPINA9Q86WD7 417 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 PIK3C3Q8NEB9 887 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 MCFD2Q8NI22 146 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 PTCD2Q8WV60 388 aaKnown RBP8.98□□□□□ -0.97
HPS4-208ENST00000464362 PHF21AQ96BD5 680 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 AURKBQ96GD4 344 aaPredicted RBP8.98□□□□□ -0.97
HPS4-208ENST00000464362 ERVK-6Q9BXR3 956 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 TRIM45Q9H8W5 580 aaPredicted RBP8.98□□□□□ -0.97
HPS4-208ENST00000464362 POLR3BQ9NW08 1133 aaPredicted RBP8.98□□□□□ -0.97
HPS4-208ENST00000464362 PRKAB1Q9Y478 270 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 FZD9O00144 591 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 PSMD11O00231 422 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 IFRD1O00458 451 aaPredicted RBP8.98□□□□□ -0.97
HPS4-208ENST00000464362 INSIG1O15503 277 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 PRSS56P0CW18 603 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 IL7RP16871 459 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 ARSDP51689 593 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 AFF1P51825 1210 aaKnown RBP8.98□□□□□ -0.97
HPS4-208ENST00000464362 YBEYP58557 167 aaPredicted RBP8.98□□□□□ -0.97
HPS4-208ENST00000464362 SULT2A1Q06520 285 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 GTF2H2Q13888 395 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 C1DQ13901 141 aaKnown RBP8.98□□□□□ -0.97
HPS4-208ENST00000464362 GRB7Q14451 532 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 PARP15Q460N3 678 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 SMYD5Q6GMV2 418 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 GTF2H2CQ6P1K8 395 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 YAF2Q8IY57 180 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 DBF4BQ8NFT6 615 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 BORCS5Q969J3 196 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 MYO19Q96H55 970 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 CAMKK2Q96RR4 588 aa8.98□□□□□ -0.97
HPS4-208ENST00000464362 AARSD1Q9BTE6 412 aaKnown RBP8.98□□□□□ -0.97
HPS4-208ENST00000464362 MARCH4Q9P2E8 410 aaPredicted RBP8.98□□□□□ -0.97
HPS4-208ENST00000464362 PIPSLA2A3N6 862 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 H0Y858 1186 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 BCKDKO14874 412 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 HOXA2O43364 376 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 ACSL4O60488 711 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 ERAL1O75616 437 aaKnown RBP8.97□□□□□ -0.97
HPS4-208ENST00000464362 BCAS2O75934 225 aaPredicted RBP8.97□□□□□ -0.97
HPS4-208ENST00000464362 UROSP10746 265 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 FMO3P31513 532 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 SH3D19Q5HYK7 790 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 GPR153Q6NV75 609 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 CHSY3Q70JA7 882 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 PHF10Q8WUB8 498 aaKnown RBP8.97□□□□□ -0.97
HPS4-208ENST00000464362 ABHD8Q96I13 439 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 NODALQ96S42 347 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 TTPALQ9BTX7 342 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 TESMINQ9Y4I5 508 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 LYVE1Q9Y5Y7 322 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 TIAM2Q8IVF5 1701 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 FAM25AB3EWG3 89 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 FAM25CB3EWG5 89 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 FAM25GB3EWG6 89 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms