RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 PPHLN1Q8NEY8 458 aaKnown RBP12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 LIN37Q96GY3 246 aaPredicted RBP12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 IL22Q9GZX6 179 aa12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 MRM3Q9HC36 420 aaKnown RBP12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 ARFGAP3Q9NP61 516 aa12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 RNF14Q9UBS8 474 aa12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 RABGEF1Q9UJ41 708 aa12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 TCAF1Q9Y4C2 921 aa12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 ACACBO00763 2458 aa12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 F8W8V4 182 aa12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 QSOX1O00391 747 aa12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 MTX2O75431 263 aa12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 KRT14P02533 472 aa12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 XRCC1P18887 633 aaPredicted RBP12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 PCID2Q5JVF3 399 aa12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 TTC27Q6P3X3 843 aa12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 LRRC8BQ6P9F7 803 aa12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 CCDC137Q6PK04 289 aaKnown RBP12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 AFTPHQ6ULP2 937 aa12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 SLC37A2Q8TED4 501 aa12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 ZCCHC14Q8WYQ9 949 aaKnown RBP12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 SLCO2A1Q92959 643 aa12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 TTC1Q99614 292 aa12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 AP1M1Q9BXS5 423 aa12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 CEP295Q9C0D2 2601 aa12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 STRADBQ9C0K7 418 aa12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 VPS37BQ9H9H4 285 aa12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 BFARQ9NZS9 450 aa12.86□□□□□ -0.35
R3HDM1-213ENST00000463230 A0A1W2PQM1 296 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 CTAGE9A4FU28 777 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 LILRA5A6NI73 299 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 DXOO77932 396 aaKnown RBP12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 AP2A2O94973 939 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 ACRV1P26436 265 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 TMEM220Q6QAJ8 160 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 CERS6Q6ZMG9 384 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 SLC23A2Q9UGH3 650 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 NEU2Q9Y3R4 380 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 CCDC187A0A096LP49 1063 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 MGAT4DA6NG13 374 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 POP7O75817 140 aaKnown RBP12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 CPNE6O95741 557 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 MLNP12872 115 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 PPARGP37231 505 aaPredicted RBP12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 HALP42357 657 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 LSSP48449 732 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 PRLHRP49683 370 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 UBE2IP63279 158 aaKnown RBP12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 TMPRSS15P98073 1019 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 HHEXQ03014 270 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 TRA2AQ13595 282 aaKnown RBP eCLIP12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 KCNJ11Q14654 390 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 ST3GAL2Q16842 350 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 ZRANB3Q5FWF4 1079 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 PACS1Q6VY07 963 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 PRUNE1Q86TP1 453 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 BEND7Q8N7W2 519 aaPredicted RBP12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 MCUQ8NE86 351 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 OR2L2Q8NH16 312 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 OSGEPL1Q9H4B0 414 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 POLR1BQ9H9Y6 1135 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 POT1Q9NUX5 634 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 ACSL5Q9ULC5 683 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 PCDHGA8Q9Y5G5 932 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 ENTPD2Q9Y5L3 495 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 SAR1BQ9Y6B6 198 aa12.85□□□□□ -0.35
R3HDM1-213ENST00000463230 C17orf113A0A1B0GUU1 675 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 PPM1DO15297 605 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 ATP1B2P14415 290 aaPredicted RBP12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 CTSCP53634 463 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 INHBCP55103 352 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 CLDN6P56747 220 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 ZFP36L1Q07352 338 aaKnown RBP12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 GPS1Q13098 491 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 AARS2Q5JTZ9 985 aaKnown RBP12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 SYDE1Q6ZW31 735 aaPredicted RBP12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 SFTPA2Q8IWL1 248 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 OR13J1Q8NGT2 312 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 OR10G6Q8NH81 332 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 WDR36Q8NI36 951 aaKnown RBP12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 PATE1Q8WXA2 126 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 SLC38A3Q99624 504 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 XAB2Q9HCS7 855 aaKnown RBP12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 KCNK4Q9NYG8 393 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 CPNE7Q9UBL6 633 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 PCYOX1Q9UHG3 505 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 TPRP12270 2363 aaKnown RBP12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 GPR39O43194 453 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 B4GAT1O43505 415 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 SNX2O60749 519 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 EML2O95834 649 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 FOXN2P32314 431 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 CA5AP35218 305 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 GRIA1P42261 906 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 PLA2G4EQ3MJ16 856 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 METRNLQ641Q3 311 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 PIM3Q86V86 326 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 SERPINA9Q86WD7 417 aa12.84□□□□□ -0.35
R3HDM1-213ENST00000463230 MPP5Q8N3R9 675 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms