RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 NCBP2-AS2Q69YL0 99 aa7.45□□□□□ -1.22
UBE4B-204ENST00000462658 DARS2Q6PI48 645 aaKnown RBP7.45□□□□□ -1.22
UBE4B-204ENST00000462658 TMCO3Q6UWJ1 677 aa7.45□□□□□ -1.22
UBE4B-204ENST00000462658 RFX8Q6ZV50 586 aa7.45□□□□□ -1.22
UBE4B-204ENST00000462658 BZW1Q7L1Q6 419 aaKnown RBP7.45□□□□□ -1.22
UBE4B-204ENST00000462658 PDSS2Q86YH6 399 aa7.45□□□□□ -1.22
UBE4B-204ENST00000462658 ALLCQ8N6M5 410 aa7.45□□□□□ -1.22
UBE4B-204ENST00000462658 ATP6V0D2Q8N8Y2 350 aa7.45□□□□□ -1.22
UBE4B-204ENST00000462658 SCAMP4Q969E2 229 aa7.45□□□□□ -1.22
UBE4B-204ENST00000462658 RNF31Q96EP0 1072 aa7.45□□□□□ -1.22
UBE4B-204ENST00000462658 TMEM121Q9BTD3 319 aa7.45□□□□□ -1.22
UBE4B-204ENST00000462658 NACA2Q9H009 215 aa7.45□□□□□ -1.22
UBE4B-204ENST00000462658 SIK2Q9H0K1 926 aa7.45□□□□□ -1.22
UBE4B-204ENST00000462658 DPH5Q9H2P9 285 aa7.45□□□□□ -1.22
UBE4B-204ENST00000462658 ZNF334Q9HCZ1 680 aaPredicted RBP7.45□□□□□ -1.22
UBE4B-204ENST00000462658 ARFGAP3Q9NP61 516 aa7.45□□□□□ -1.22
UBE4B-204ENST00000462658 ETNK2Q9NVF9 386 aa7.45□□□□□ -1.22
UBE4B-204ENST00000462658 RLIMQ9NVW2 624 aa7.45□□□□□ -1.22
UBE4B-204ENST00000462658 SNX24Q9Y343 169 aa7.45□□□□□ -1.22
UBE4B-204ENST00000462658 HBS1LQ9Y450 684 aaKnown RBP7.45□□□□□ -1.22
UBE4B-204ENST00000462658 HEY1Q9Y5J3 304 aa7.45□□□□□ -1.22
UBE4B-204ENST00000462658 KIAA1671Q9BY89 1806 aa7.45□□□□□ -1.22
UBE4B-204ENST00000462658 MUC3AQ02505 3323 aa7.45□□□□□ -1.22
UBE4B-204ENST00000462658 BRWD1Q9NSI6 2320 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 CENPVL1A0A0U1RR11 272 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 CAPN8A6NHC0 703 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 EPOPA6NHQ4 379 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 MARCH11A6NNE9 402 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 SGK1O00141 431 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 TPP1O14773 563 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 DCLK1O15075 740 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 COCHO43405 550 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 SEC31AO94979 1220 aaKnown RBP7.44□□□□□ -1.22
UBE4B-204ENST00000462658 PEX11BO96011 259 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 C1RP00736 705 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 HMBSP08397 361 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 SRGAP2BP0DMP2 458 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 EPHB2P29323 1055 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 STIP1P31948 543 aaKnown RBP7.44□□□□□ -1.22
UBE4B-204ENST00000462658 HTR7P34969 479 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 TUBP50607 506 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 COG7P83436 770 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 GBE1Q04446 702 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 SLC10A2Q12908 348 aaPredicted RBP7.44□□□□□ -1.22
UBE4B-204ENST00000462658 PTK6Q13882 451 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 DPYSQ14117 519 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 HLTFQ14527 1009 aaKnown RBP eCLIP7.44□□□□□ -1.22
UBE4B-204ENST00000462658 PAFAH1B3Q15102 231 aaKnown RBP7.44□□□□□ -1.22
UBE4B-204ENST00000462658 PPM1LQ5SGD2 360 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 BEND6Q5SZJ8 279 aaPredicted RBP7.44□□□□□ -1.22
UBE4B-204ENST00000462658 CRIP3Q6Q6R5 217 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 RTL10Q7L3V2 364 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 TMEM150AQ86TG1 271 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 UNC45BQ8IWX7 931 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 CFAP52Q8N1V2 620 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 ELMOD1Q8N336 334 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 CCDC89Q8N998 374 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 EIF1ADQ8N9N8 165 aaKnown RBP7.44□□□□□ -1.22
UBE4B-204ENST00000462658 ZNF483Q8TF39 744 aaPredicted RBP7.44□□□□□ -1.22
UBE4B-204ENST00000462658 NACC2Q96BF6 587 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 TBC1D31Q96DN5 1066 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 LRIG1Q96JA1 1093 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 BTN2A3PQ96KV6 586 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 MRGPRX1Q96LB2 322 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 C1orf74Q96LT6 269 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 MLST8Q9BVC4 326 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 C10orf88Q9H8K7 445 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 CERS4Q9HA82 394 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 GPR35Q9HC97 309 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 DKK2Q9UBU2 259 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 ASIC3Q9UHC3 531 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 XPO7Q9UIA9 1087 aaKnown RBP7.44□□□□□ -1.22
UBE4B-204ENST00000462658 NFU1Q9UMS0 254 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 NEU2Q9Y3R4 380 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 MFHAS1Q9Y4C4 1052 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 HS3ST4Q9Y661 456 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 MYO7AQ13402 2215 aa7.44□□□□□ -1.22
UBE4B-204ENST00000462658 PLXNA3P51805 1871 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 PRRC2BQ5JSZ5 2229 aaKnown RBP7.43□□□□□ -1.22
UBE4B-204ENST00000462658 A0A1W2PPL8 197 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 BCLAF3A2AJT9 711 aaKnown RBP7.43□□□□□ -1.22
UBE4B-204ENST00000462658 CFAP69A5D8W1 941 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 TMEM200CA6NKL6 621 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 HACD1B0YJ81 288 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 E9PAM4 449 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 M0QYG6 137 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 PER2O15055 1255 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 CCL16O15467 120 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 NARSO43776 548 aaKnown RBP7.43□□□□□ -1.22
UBE4B-204ENST00000462658 OAS1P00973 400 aaKnown RBP7.43□□□□□ -1.22
UBE4B-204ENST00000462658 IFNB1P01574 187 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 IGLV3-27P01718 113 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 ZSCAN5DPP0CG00 497 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 DDX6P26196 483 aaKnown RBP eCLIP7.43□□□□□ -1.22
UBE4B-204ENST00000462658 GABRR2P28476 465 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 RBL1P28749 1068 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 PTGS2P35354 604 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 RPL21P46778 160 aaKnown RBP7.43□□□□□ -1.22
UBE4B-204ENST00000462658 KCNJ5P48544 419 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 VPS41P49754 854 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms