RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 VCLP18206 1134 aa11.43□□□□□ -0.58
PCCB-203ENST00000462542 KLK7P49862 253 aa11.43□□□□□ -0.58
PCCB-203ENST00000462542 TUBB4BP68371 445 aa11.43□□□□□ -0.58
PCCB-203ENST00000462542 TUBB2AQ13885 445 aa11.43□□□□□ -0.58
PCCB-203ENST00000462542 TDRD12Q587J7 1177 aaKnown RBP11.43□□□□□ -0.58
PCCB-203ENST00000462542 TMTC4Q5T4D3 741 aa11.43□□□□□ -0.58
PCCB-203ENST00000462542 VWA5B1Q5TIE3 1220 aa11.43□□□□□ -0.58
PCCB-203ENST00000462542 SP5Q6BEB4 398 aaPredicted RBP11.43□□□□□ -0.58
PCCB-203ENST00000462542 ADGRG6Q86SQ4 1221 aa11.43□□□□□ -0.58
PCCB-203ENST00000462542 TMEM126BQ8IUX1 230 aa11.43□□□□□ -0.58
PCCB-203ENST00000462542 D2HGDHQ8N465 521 aa11.43□□□□□ -0.58
PCCB-203ENST00000462542 NEK11Q8NG66 645 aa11.43□□□□□ -0.58
PCCB-203ENST00000462542 BARD1Q99728 777 aaKnown RBP11.43□□□□□ -0.58
PCCB-203ENST00000462542 ZSCAN5AQ9BUG6 496 aa11.43□□□□□ -0.58
PCCB-203ENST00000462542 MLPHQ9BV36 600 aaPredicted RBP11.43□□□□□ -0.58
PCCB-203ENST00000462542 TUBB2BQ9BVA1 445 aa11.43□□□□□ -0.58
PCCB-203ENST00000462542 TDRD1Q9BXT4 1180 aaKnown RBP11.43□□□□□ -0.58
PCCB-203ENST00000462542 CHST8Q9H2A9 424 aa11.43□□□□□ -0.58
PCCB-203ENST00000462542 PCDH9Q9HC56 1237 aa11.43□□□□□ -0.58
PCCB-203ENST00000462542 LATS2Q9NRM7 1088 aa11.43□□□□□ -0.58
PCCB-203ENST00000462542 ETNK2Q9NVF9 386 aa11.43□□□□□ -0.58
PCCB-203ENST00000462542 TAB2Q9NYJ8 693 aa11.43□□□□□ -0.58
PCCB-203ENST00000462542 TCFL5Q9UL49 500 aa11.43□□□□□ -0.58
PCCB-203ENST00000462542 UBA6A0AVT1 1052 aaPredicted RBP11.42□□□□□ -0.58
PCCB-203ENST00000462542 HEATR9A2RTY3 570 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 ANKRD66B4E2M5 251 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 MEN1O00255 615 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 MATN3O15232 486 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 EBLN1P0CF75 366 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 BRAFP15056 766 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 FECHP22830 423 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 RPL10P27635 214 aaKnown RBP11.42□□□□□ -0.58
PCCB-203ENST00000462542 HALP42357 657 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 ZNF165P49910 485 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 GPS2Q13227 327 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 KCNAB1Q14722 419 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 ZNF569Q5MCW4 686 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 LYPLAL1Q5VWZ2 237 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 TIGD7Q6NT04 549 aaPredicted RBP11.42□□□□□ -0.58
PCCB-203ENST00000462542 IGFL3Q6UXB1 125 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 CARFQ8N187 725 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 CPT1BQ92523 772 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 FATE1Q969F0 183 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 SGSM3Q96HU1 749 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 IP6K3Q96PC2 410 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 CSPG4P5Q96PW8 444 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 RANBP9Q96S59 729 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 SPATA16Q9BXB7 569 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 ADGRE3Q9BY15 652 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 XPO4Q9C0E2 1151 aaKnown RBP11.42□□□□□ -0.58
PCCB-203ENST00000462542 AGPAT4Q9NRZ5 378 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 DNAJC16Q9Y2G8 782 aa11.42□□□□□ -0.58
PCCB-203ENST00000462542 TLCD2A6NGC4 264 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 OR52A4PA6NMU1 304 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 IPO13O94829 963 aaKnown RBP11.41□□□□□ -0.58
PCCB-203ENST00000462542 CDK14O94921 469 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 IGHEP01854 428 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 ALPPP05187 535 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 FERP16591 822 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 DCDC1P59894 354 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 UBE2HP62256 183 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 CDK18Q07002 472 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 KRT31Q15323 416 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 SEPT7Q16181 437 aaKnown RBP11.41□□□□□ -0.58
PCCB-203ENST00000462542 DPCR1Q3MIW9 517 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 CRB2Q5IJ48 1285 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 PLEKHS1Q5SXH7 462 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 DSELQ8IZU8 1212 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 TRAM1L1Q8N609 369 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 ZBTB2Q8N680 514 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 ENDOVQ8N8Q3 282 aaKnown RBP11.41□□□□□ -0.58
PCCB-203ENST00000462542 SLC38A9Q8NBW4 561 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 ST6GALNAC3Q8NDV1 305 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 LPCAT1Q8NF37 534 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 ZFPM2Q8WW38 1151 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 TM9SF4Q92544 642 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 MAML1Q92585 1016 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 GLYATL1Q969I3 302 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 ZNF501Q96CX3 271 aaPredicted RBP11.41□□□□□ -0.58
PCCB-203ENST00000462542 MAP3K3Q99759 626 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 ILKAPQ9H0C8 392 aaPredicted RBP11.41□□□□□ -0.58
PCCB-203ENST00000462542 ARFGAP3Q9NP61 516 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 RBM22Q9NW64 420 aaKnown RBP eCLIP11.41□□□□□ -0.58
PCCB-203ENST00000462542 PDZD2O15018 2839 aa11.41□□□□□ -0.58
PCCB-203ENST00000462542 ZBTB11O95625 1053 aaPredicted RBP11.4□□□□□ -0.58
PCCB-203ENST00000462542 PRF1P14222 555 aa11.4□□□□□ -0.58
PCCB-203ENST00000462542 CCNCP24863 283 aa11.4□□□□□ -0.58
PCCB-203ENST00000462542 ITGA3P26006 1051 aa11.4□□□□□ -0.58
PCCB-203ENST00000462542 GRNP28799 593 aaKnown RBP11.4□□□□□ -0.58
PCCB-203ENST00000462542 DRG2P55039 364 aaKnown RBP11.4□□□□□ -0.58
PCCB-203ENST00000462542 DSC2Q02487 901 aa11.4□□□□□ -0.58
PCCB-203ENST00000462542 IHHQ14623 411 aa11.4□□□□□ -0.58
PCCB-203ENST00000462542 PLCL1Q15111 1095 aa11.4□□□□□ -0.58
PCCB-203ENST00000462542 ZRSR2Q15696 482 aaKnown RBP11.4□□□□□ -0.58
PCCB-203ENST00000462542 QPCTQ16769 361 aa11.4□□□□□ -0.58
PCCB-203ENST00000462542 PLA2G4EQ3MJ16 856 aa11.4□□□□□ -0.58
PCCB-203ENST00000462542 DNTTIP2Q5QJE6 756 aaKnown RBP11.4□□□□□ -0.58
PCCB-203ENST00000462542 CCDC122Q5T0U0 273 aa11.4□□□□□ -0.58
PCCB-203ENST00000462542 ZNF648Q5T619 568 aaPredicted RBP11.4□□□□□ -0.58
PCCB-203ENST00000462542 CRTC3Q6UUV7 619 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms