RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 NCBP2-AS2Q69YL0 99 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 PDPK2PQ6A1A2 396 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 JMJD6Q6NYC1 403 aaPredicted RBP10.65□□□□□ -0.7
CBX3-205ENST00000462165 CRTC3Q6UUV7 619 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 ZNF571Q7Z3V5 609 aaPredicted RBP10.65□□□□□ -0.7
CBX3-205ENST00000462165 HPS6Q86YV9 775 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 TRAM1L1Q8N609 369 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 NIPA2Q8N8Q9 360 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 Q8NA96 180 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 GPR26Q8NDV2 337 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 UBXN4Q92575 508 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 CXorf40BQ96DE9 158 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 TSGA13Q96PP4 275 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 NUP85Q9BW27 656 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 SPATA16Q9BXB7 569 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 HAUS4Q9H6D7 363 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 DTLQ9NZJ0 730 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 FARSAQ9Y285 508 aaKnown RBP10.65□□□□□ -0.7
CBX3-205ENST00000462165 DNAJC16Q9Y2G8 782 aa10.65□□□□□ -0.7
CBX3-205ENST00000462165 LRRC53A6NM62 1247 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 DDX3XO00571 662 aaKnown RBP eCLIP10.64□□□□□ -0.71
CBX3-205ENST00000462165 VEGFDO43915 354 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 DPM1O60762 260 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 CLDN1O95832 211 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 MMP2P08253 660 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 CD48P09326 243 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 CDK11BP21127 795 aaKnown RBP10.64□□□□□ -0.71
CBX3-205ENST00000462165 IDSP22304 550 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 FECHP22830 423 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 RPL10P27635 214 aaKnown RBP10.64□□□□□ -0.71
CBX3-205ENST00000462165 COL8A1P27658 744 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 DCTP40126 519 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 PRKCIP41743 596 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 PPP1CAP62136 330 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 ACY1Q03154 408 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 KRT81Q14533 505 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 PRR30Q53SZ7 412 aaPredicted RBP10.64□□□□□ -0.71
CBX3-205ENST00000462165 CCDC122Q5T0U0 273 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 ZNF517Q6ZMY9 492 aaPredicted RBP10.64□□□□□ -0.71
CBX3-205ENST00000462165 KMT5CQ86Y97 462 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 TICAM1Q8IUC6 712 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 ZNF547Q8IVP9 402 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 PRR7Q8TB68 274 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 ADAMTS17Q8TE56 1095 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 GLYATL1Q969I3 302 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 ZNF514Q96K75 400 aaPredicted RBP10.64□□□□□ -0.71
CBX3-205ENST00000462165 ISCUQ9H1K1 167 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 ZFYVE1Q9HBF4 777 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 SLAMF7Q9NQ25 335 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 RAD18Q9NS91 495 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 AIPL1Q9NZN9 384 aa10.64□□□□□ -0.71
CBX3-205ENST00000462165 ABCA12Q86UK0 2595 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 SSU72P8A0A1W2PR75 194 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 CPNE3O75131 537 aaKnown RBP10.63□□□□□ -0.71
CBX3-205ENST00000462165 LDLRP01130 860 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 EBLN1P0CF75 366 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 CD86P42081 329 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 PTGIRP43119 386 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 ARSEP51690 589 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 DRG2P55039 364 aaKnown RBP10.63□□□□□ -0.71
CBX3-205ENST00000462165 PDE1BQ01064 536 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 MYL5Q02045 173 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 KCNAB1Q14722 419 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 ASIC2Q16515 512 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 CCDC183Q5T5S1 534 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 IZUMO3Q5VZ72 239 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 ALS2CLQ60I27 953 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 RBM43Q6ZSC3 357 aaKnown RBP10.63□□□□□ -0.71
CBX3-205ENST00000462165 TMC3Q7Z5M5 1100 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 C11orf96Q7Z7L8 435 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 D2HGDHQ8N465 521 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 RBMXL3Q8N7X1 1067 aaKnown RBP10.63□□□□□ -0.71
CBX3-205ENST00000462165 FDCSPQ8NFU4 85 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 PNPLA2Q96AD5 504 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 CD180Q99467 661 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 MAP3K3Q99759 626 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 ADGRE3Q9BY15 652 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 FGF21Q9NSA1 209 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 ERRFI1Q9UJM3 462 aaPredicted RBP10.63□□□□□ -0.71
CBX3-205ENST00000462165 WDR37Q9Y2I8 494 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 CSMD1Q96PZ7 3565 aa10.63□□□□□ -0.71
CBX3-205ENST00000462165 TLCD2A6NGC4 264 aa10.62□□□□□ -0.71
CBX3-205ENST00000462165 KCNJ13O60928 360 aa10.62□□□□□ -0.71
CBX3-205ENST00000462165 MTX2O75431 263 aa10.62□□□□□ -0.71
CBX3-205ENST00000462165 SCRG1O75711 98 aa10.62□□□□□ -0.71
CBX3-205ENST00000462165 TMEM63AO94886 807 aa10.62□□□□□ -0.71
CBX3-205ENST00000462165 CDK14O94921 469 aa10.62□□□□□ -0.71
CBX3-205ENST00000462165 RAB40ALP0C0E4 278 aa10.62□□□□□ -0.71
CBX3-205ENST00000462165 SPTBP11277 2137 aa10.62□□□□□ -0.71
CBX3-205ENST00000462165 VCLP18206 1134 aa10.62□□□□□ -0.71
CBX3-205ENST00000462165 HALP42357 657 aa10.62□□□□□ -0.71
CBX3-205ENST00000462165 GPS2Q13227 327 aa10.62□□□□□ -0.71
CBX3-205ENST00000462165 DPYSL3Q14195 570 aa10.62□□□□□ -0.71
CBX3-205ENST00000462165 GALNT3Q14435 633 aa10.62□□□□□ -0.71
CBX3-205ENST00000462165 KHDC1Q4VXA5 237 aaKnown RBP10.62□□□□□ -0.71
CBX3-205ENST00000462165 E4F1Q66K89 784 aaPredicted RBP10.62□□□□□ -0.71
CBX3-205ENST00000462165 SLC6A19Q695T7 634 aa10.62□□□□□ -0.71
CBX3-205ENST00000462165 KLHL35Q6PF15 583 aa10.62□□□□□ -0.71
CBX3-205ENST00000462165 CERS6Q6ZMG9 384 aa10.62□□□□□ -0.71
CBX3-205ENST00000462165 RHOT1Q8IXI2 618 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms