RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 NRDCO43847 1150 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 ITGB2P05107 769 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 CCNYL3P0C7X3 344 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 RBP3P10745 1247 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 PYGMP11217 842 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 FGF3P11487 239 aaPredicted RBP8.73□□□□□ -1.01
LDB1-203ENST00000461873 TYRP1P17643 537 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 XRCC1P18887 633 aaPredicted RBP8.73□□□□□ -1.01
LDB1-203ENST00000461873 MAP4P27816 1152 aaKnown RBP8.73□□□□□ -1.01
LDB1-203ENST00000461873 RBL1P28749 1068 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 PBLDP30039 288 aaPredicted RBP8.73□□□□□ -1.01
LDB1-203ENST00000461873 CTNNA1P35221 906 aaKnown RBP8.73□□□□□ -1.01
LDB1-203ENST00000461873 HADHAP40939 763 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 ETV5P41161 510 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 MC1RQ01726 317 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 OTUD4Q01804 1114 aaKnown RBP8.73□□□□□ -1.01
LDB1-203ENST00000461873 LY6DQ14210 128 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 ATP13A5Q4VNC0 1218 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.73□□□□□ -1.01
LDB1-203ENST00000461873 IRGCQ6NXR0 463 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 TMEM220Q6QAJ8 160 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 ZNF574Q6ZN55 896 aaPredicted RBP8.73□□□□□ -1.01
LDB1-203ENST00000461873 TMEM26Q6ZUK4 368 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 VASH2Q86V25 355 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 NLGN4XQ8N0W4 816 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 NLGN4YQ8NFZ3 816 aaPredicted RBP8.73□□□□□ -1.01
LDB1-203ENST00000461873 ZNF398Q8TD17 642 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 HEXDCQ8WVB3 486 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 ULK4Q96C45 1275 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 MED8Q96G25 268 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 PDLIM2Q96JY6 352 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 WDR24Q96S15 920 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 TTC1Q99614 292 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 TBC1D10AQ9BXI6 508 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 GBA3Q9H227 469 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 ASB8Q9H765 288 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 GPN2Q9H9Y4 310 aaPredicted RBP8.73□□□□□ -1.01
LDB1-203ENST00000461873 UCK1Q9HA47 277 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 OCIAD1Q9NX40 245 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 FEZ2Q9UHY8 353 aaPredicted RBP8.73□□□□□ -1.01
LDB1-203ENST00000461873 PCDHGA3Q9Y5H0 932 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 B3GALT1Q9Y5Z6 326 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 DNMT3AQ9Y6K1 912 aaPredicted RBP8.73□□□□□ -1.01
LDB1-203ENST00000461873 SLC30A1Q9Y6M5 507 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 COLEC10Q9Y6Z7 277 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 UBA6A0AVT1 1052 aaPredicted RBP8.72□□□□□ -1.01
LDB1-203ENST00000461873 OR2AG2A6NM03 316 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 ZNF891A8MT65 544 aaPredicted RBP8.72□□□□□ -1.01
LDB1-203ENST00000461873 MIF4GDA9UHW6 222 aaKnown RBP8.72□□□□□ -1.01
LDB1-203ENST00000461873 E7EVH7 732 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 AURKAO14965 403 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 CHUKO15111 745 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 TOX3O15405 576 aaPredicted RBP8.72□□□□□ -1.01
LDB1-203ENST00000461873 PSMD3O43242 534 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 RAD1O60671 282 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 POP7O75817 140 aaKnown RBP8.72□□□□□ -1.01
LDB1-203ENST00000461873 PRAMEF1O95521 474 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 SLC35G4P0C7Q5 338 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 ITGALP20701 1170 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 CDC25BP30305 580 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 SEPHS1P49903 392 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 VAV2P52735 878 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 DRG2P55039 364 aaKnown RBP8.72□□□□□ -1.01
LDB1-203ENST00000461873 MC2RQ01718 297 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 WASHC5Q12768 1159 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 PRKAA1Q13131 559 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 SEPT6Q14141 434 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 IHHQ14623 411 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 NOMO1Q15155 1222 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 TAF1AQ15573 450 aaPredicted RBP8.72□□□□□ -1.01
LDB1-203ENST00000461873 CHRNA6Q15825 494 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 TAZQ16635 292 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 P3H1Q32P28 736 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 ANKRD20A2Q5SQ80 823 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 FNBP1LQ5T0N5 605 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 SEL1L2Q5TEA6 688 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 ANKRD20A1Q5TYW2 823 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 CACHD1Q5VU97 1274 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 ANKRD20A3Q5VUR7 823 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 ANKS6Q68DC2 871 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 DET1Q7L5Y6 550 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 PRICKLE2Q7Z3G6 844 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 TMPRSS9Q7Z410 1059 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 HOOK3Q86VS8 718 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 ESX1Q8N693 406 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 ACTL9Q8TC94 416 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 DTX3LQ8TDB6 740 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 SNRNP27Q8WVK2 155 aaKnown RBP8.72□□□□□ -1.01
LDB1-203ENST00000461873 KRT35Q92764 455 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 STAMBPL1Q96FJ0 436 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 MRGPRX2Q96LB1 330 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 CATSPER2Q96P56 530 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 CTRCQ99895 268 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 TBL1YQ9BQ87 522 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 ULBP3Q9BZM4 244 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 PDE7BQ9NP56 450 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 IL26Q9NPH9 171 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 FBXO8Q9NRD0 319 aa8.72□□□□□ -1.01
LDB1-203ENST00000461873 IMP3Q9NV31 184 aaKnown RBP8.72□□□□□ -1.01
LDB1-203ENST00000461873 TMEM9Q9P0T7 183 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms