RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 WDR70Q9NW82 654 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 PAK5Q9P286 719 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 TMPRSS11EQ9UL52 423 aa15.16■□□□□ 0.02
VARS-219ENST00000461328 UNC13CQ8NB66 2214 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 IGHV1OR21-1A0A087WYE8 117 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 ERI2A8K979 691 aaKnown RBP15.15■□□□□ 0.02
VARS-219ENST00000461328 GAPDHSO14556 408 aaPredicted RBP15.15■□□□□ 0.02
VARS-219ENST00000461328 CHUKO15111 745 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 SRP72O76094 671 aaKnown RBP15.15■□□□□ 0.02
VARS-219ENST00000461328 F3P13726 295 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 ETS1P14921 441 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 ITIH1P19827 911 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 MSNP26038 577 aaKnown RBP15.15■□□□□ 0.02
VARS-219ENST00000461328 PBLDP30039 288 aaPredicted RBP15.15■□□□□ 0.02
VARS-219ENST00000461328 SLC5A2P31639 672 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 ZNF140P52738 457 aaPredicted RBP15.15■□□□□ 0.02
VARS-219ENST00000461328 MAPK10P53779 464 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 GPLD1P80108 840 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 NFATC2Q13469 925 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 C16orf72Q14CZ0 275 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 IYDQ6PHW0 289 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 PRUNE1Q86TP1 453 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 SLC9B2Q86UD5 537 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 TRIM48Q8IWZ4 208 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 AVL9Q8NBF6 648 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 OR10G6Q8NH81 332 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 ULK4Q96C45 1275 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 DCUN1D1Q96GG9 259 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 DNAJC1Q96KC8 554 aaKnown RBP15.15■□□□□ 0.02
VARS-219ENST00000461328 CCDC74BQ96LY2 380 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 ARNT2Q9HBZ2 717 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 PRDM8Q9NQV8 689 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 SMOXQ9NWM0 555 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 ZKSCAN5Q9Y2L8 839 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 JRKLQ9Y4A0 524 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 PCDHGA7Q9Y5G6 932 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 SLC30A1Q9Y6M5 507 aa15.15■□□□□ 0.02
VARS-219ENST00000461328 KIR2DS5A0A0G2JLQ3 304 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 A0A0G2JNG1 304 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 IGHV5-10-1A0A0J9YXX1 117 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 CCDC78A2IDD5 438 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 A6NCN8 305 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 OR2AG2A6NM03 316 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 OR5K4A6NMS3 321 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 KIR2DS3K7RE56 304 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 CCL22O00626 93 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 DUX1O43812 170 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 RALBP11234 206 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 HOXB3P14651 431 aaPredicted RBP15.14■□□□□ 0.01
VARS-219ENST00000461328 CSF2RBP32927 897 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 ETV5P41161 510 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 MAPK9P45984 424 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 CLCNKAP51800 687 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 CDH17Q12864 832 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 KIR2DS5Q14953 304 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 SIX1Q15475 284 aaPredicted RBP15.14■□□□□ 0.01
VARS-219ENST00000461328 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.14■□□□□ 0.01
VARS-219ENST00000461328 ZNF574Q6ZN55 896 aaPredicted RBP15.14■□□□□ 0.01
VARS-219ENST00000461328 DET1Q7L5Y6 550 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 ZNF547Q8IVP9 402 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 RASGEF1AQ8N9B8 481 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 RCBTB1Q8NDN9 531 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 OR4D9Q8NGE8 314 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 OR52K1Q8NGK4 314 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 SH3KBP1Q96B97 665 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 DPYSL5Q9BPU6 564 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 KCNF1Q9H3M0 494 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 CPNE5Q9HCH3 593 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 SARS2Q9NP81 518 aaKnown RBP15.14■□□□□ 0.01
VARS-219ENST00000461328 TRMT1Q9NXH9 659 aaKnown RBP15.14■□□□□ 0.01
VARS-219ENST00000461328 SLC23A2Q9UGH3 650 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 CACNA1GO43497 2377 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 LAMA5O15230 3695 aa15.14■□□□□ 0.01
VARS-219ENST00000461328 ZFC3H1O60293 1989 aaKnown RBP15.13■□□□□ 0.01
VARS-219ENST00000461328 CFAP99D6REC4 459 aa15.13■□□□□ 0.01
VARS-219ENST00000461328 HGSO14964 777 aaPredicted RBP15.13■□□□□ 0.01
VARS-219ENST00000461328 NVLO15381 856 aaKnown RBP15.13■□□□□ 0.01
VARS-219ENST00000461328 LDB2O43679 373 aa15.13■□□□□ 0.01
VARS-219ENST00000461328 KIF5CO60282 957 aa15.13■□□□□ 0.01
VARS-219ENST00000461328 APRTP07741 180 aa15.13■□□□□ 0.01
VARS-219ENST00000461328 ZSCAN5DPP0CG00 497 aa15.13■□□□□ 0.01
VARS-219ENST00000461328 IDSP22304 550 aa15.13■□□□□ 0.01
VARS-219ENST00000461328 MPSTP25325 297 aa15.13■□□□□ 0.01
VARS-219ENST00000461328 MC4RP32245 332 aa15.13■□□□□ 0.01
VARS-219ENST00000461328 CTSCP53634 463 aa15.13■□□□□ 0.01
VARS-219ENST00000461328 LIMK2P53671 638 aa15.13■□□□□ 0.01
VARS-219ENST00000461328 BASP1P80723 227 aaKnown RBP15.13■□□□□ 0.01
VARS-219ENST00000461328 CLN3Q13286 438 aa15.13■□□□□ 0.01
VARS-219ENST00000461328 SQSTM1Q13501 440 aa15.13■□□□□ 0.01
VARS-219ENST00000461328 SOWAHCQ53LP3 525 aaPredicted RBP15.13■□□□□ 0.01
VARS-219ENST00000461328 ZRANB3Q5FWF4 1079 aa15.13■□□□□ 0.01
VARS-219ENST00000461328 FNBP1LQ5T0N5 605 aa15.13■□□□□ 0.01
VARS-219ENST00000461328 TMEM220Q6QAJ8 160 aa15.13■□□□□ 0.01
VARS-219ENST00000461328 SLC35F6Q8N357 371 aa15.13■□□□□ 0.01
VARS-219ENST00000461328 USP7Q93009 1102 aa15.13■□□□□ 0.01
VARS-219ENST00000461328 UBL7Q96S82 380 aaPredicted RBP15.13■□□□□ 0.01
VARS-219ENST00000461328 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.13■□□□□ 0.01
VARS-219ENST00000461328 FAM96AQ9H5X1 160 aa15.13■□□□□ 0.01
VARS-219ENST00000461328 HOMER3Q9NSC5 361 aa15.13■□□□□ 0.01
VARS-219ENST00000461328 CPNE7Q9UBL6 633 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms