RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 LMX1AQ8TE12 382 aa10.96□□□□□ -0.65
APTX-209ENST00000460940 RHBDD1Q8TEB9 315 aa10.96□□□□□ -0.65
APTX-209ENST00000460940 ULK4Q96C45 1275 aa10.96□□□□□ -0.65
APTX-209ENST00000460940 DTNBP1Q96EV8 351 aa10.96□□□□□ -0.65
APTX-209ENST00000460940 DNAJC1Q96KC8 554 aaKnown RBP10.96□□□□□ -0.65
APTX-209ENST00000460940 OR2M4Q96R27 311 aa10.96□□□□□ -0.65
APTX-209ENST00000460940 KRT12Q99456 494 aa10.96□□□□□ -0.65
APTX-209ENST00000460940 TCEAL2Q9H3H9 227 aaPredicted RBP10.96□□□□□ -0.65
APTX-209ENST00000460940 MRM3Q9HC36 420 aaKnown RBP10.96□□□□□ -0.65
APTX-209ENST00000460940 TRIM39Q9HCM9 518 aa10.96□□□□□ -0.65
APTX-209ENST00000460940 UCKL1Q9NWZ5 548 aa10.96□□□□□ -0.65
APTX-209ENST00000460940 NCKIPSDQ9NZQ3 722 aa10.96□□□□□ -0.65
APTX-209ENST00000460940 FTSJ1Q9UET6 329 aa10.96□□□□□ -0.65
APTX-209ENST00000460940 TCAF1Q9Y4C2 921 aa10.96□□□□□ -0.65
APTX-209ENST00000460940 KCTD3Q9Y597 815 aa10.96□□□□□ -0.65
APTX-209ENST00000460940 COL5A1P20908 1838 aaPredicted RBP10.96□□□□□ -0.65
APTX-209ENST00000460940 LRP4O75096 1905 aa10.96□□□□□ -0.66
APTX-209ENST00000460940 SMAPO00193 183 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 DNALI1O14645 258 aaPredicted RBP10.95□□□□□ -0.66
APTX-209ENST00000460940 TMEM63AO94886 807 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 ASMTLO95671 621 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 VIMP08670 466 aaKnown RBP10.95□□□□□ -0.66
APTX-209ENST00000460940 MYZAPP0CAP1 466 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 NOVA1P51513 510 aaKnown RBP10.95□□□□□ -0.66
APTX-209ENST00000460940 SESN2P58004 480 aaPredicted RBP10.95□□□□□ -0.66
APTX-209ENST00000460940 PPP2R2AP63151 447 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 XIAPP98170 497 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 NFATC2Q13469 925 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 PEX6Q13608 980 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 LRP8Q14114 963 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 PTPRCAPQ14761 206 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 GPR33Q49SQ1 333 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 PCID2Q5JVF3 399 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 RNASEH2BQ5TBB1 312 aaKnown RBP10.95□□□□□ -0.66
APTX-209ENST00000460940 THEMIS2Q5TEJ8 643 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 RD3Q7Z3Z2 195 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 MAATS1Q7Z4T9 603 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 SNX20Q7Z614 316 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 GLRX5Q86SX6 157 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 GKN2Q86XP6 184 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 NAT8LQ8N9F0 302 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 CCDC197Q8NCU1 140 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 DEFB124Q8NES8 71 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 SCG3Q8WXD2 468 aaKnown RBP10.95□□□□□ -0.66
APTX-209ENST00000460940 TSC22D3Q99576 134 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 YIPF3Q9GZM5 350 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 CNOT10Q9H9A5 744 aaKnown RBP10.95□□□□□ -0.66
APTX-209ENST00000460940 MRPL40Q9NQ50 206 aaKnown RBP10.95□□□□□ -0.66
APTX-209ENST00000460940 EVA1BQ9NVM1 165 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 MOSPD1Q9UJG1 213 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 BTBD3Q9Y2F9 522 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 OAS3Q9Y6K5 1087 aaKnown RBP10.95□□□□□ -0.66
APTX-209ENST00000460940 TCRBV7S3A2A0A539 114 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 FAM187AA6NFU0 413 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 AGAP14A8MT82 685 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 TTI1O43156 1089 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 ANXA6P08133 673 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 IMPDH2P12268 514 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 MC4RP32245 332 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 MAGEA8P43361 318 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 GNPDA1P46926 289 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 CD151P48509 253 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 SLC7A5Q01650 507 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 ACVR1Q04771 509 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 ILF3Q12906 894 aaKnown RBP eCLIP10.95□□□□□ -0.66
APTX-209ENST00000460940 MORF4L2Q15014 288 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 PYCR3Q53H96 274 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 TSTD2Q5T7W7 516 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 ANKRD22Q5VYY1 191 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 ZCCHC8Q6NZY4 707 aaKnown RBP10.95□□□□□ -0.66
APTX-209ENST00000460940 RBM12BQ8IXT5 1001 aaKnown RBP10.95□□□□□ -0.66
APTX-209ENST00000460940 EID2Q8N6I1 236 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 ANKS4BQ8N8V4 417 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 FAM181AQ8N9Y4 354 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 ZNF398Q8TD17 642 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 HEXDCQ8WVB3 486 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 GSDMCQ9BYG8 508 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 ASB8Q9H765 288 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 PAPOLBQ9NRJ5 636 aaKnown RBP10.95□□□□□ -0.66
APTX-209ENST00000460940 TMPRSS11EQ9UL52 423 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 PLAAQ9Y263 795 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 TMEM98Q9Y2Y6 226 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 SLC30A1Q9Y6M5 507 aa10.95□□□□□ -0.66
APTX-209ENST00000460940 FFAR2O15552 330 aa10.94□□□□□ -0.66
APTX-209ENST00000460940 TNFSF14O43557 240 aa10.94□□□□□ -0.66
APTX-209ENST00000460940 NUAK1O60285 661 aa10.94□□□□□ -0.66
APTX-209ENST00000460940 DNAJC6O75061 913 aa10.94□□□□□ -0.66
APTX-209ENST00000460940 WFS1O76024 890 aa10.94□□□□□ -0.66
APTX-209ENST00000460940 KCNK5O95279 499 aa10.94□□□□□ -0.66
APTX-209ENST00000460940 GIMD1P0DJR0 217 aa10.94□□□□□ -0.66
APTX-209ENST00000460940 MAGEA3P43357 314 aa10.94□□□□□ -0.66
APTX-209ENST00000460940 POLD2P49005 469 aa10.94□□□□□ -0.66
APTX-209ENST00000460940 TMPRSS15P98073 1019 aa10.94□□□□□ -0.66
APTX-209ENST00000460940 CACNG1Q06432 222 aa10.94□□□□□ -0.66
APTX-209ENST00000460940 GTF2H3Q13889 308 aa10.94□□□□□ -0.66
APTX-209ENST00000460940 ZRSR2Q15696 482 aaKnown RBP10.94□□□□□ -0.66
APTX-209ENST00000460940 GPRC6AQ5T6X5 926 aa10.94□□□□□ -0.66
APTX-209ENST00000460940 IZUMO3Q5VZ72 239 aa10.94□□□□□ -0.66
APTX-209ENST00000460940 AFTPHQ6ULP2 937 aa10.94□□□□□ -0.66
APTX-209ENST00000460940 SPATA21Q7Z572 469 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms