RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 B4DGG1 531 aa13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 CACNB4O00305 520 aaPredicted RBP13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 GAPDHSO14556 408 aaPredicted RBP13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 ANXA9O76027 345 aa13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 PIRTP0C851 137 aa13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 BPIP17213 487 aa13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 PSMA3P25788 255 aa13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 STIP1P31948 543 aaKnown RBP13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 GEMP55040 296 aa13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 MC1RQ01726 317 aa13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 PARP6Q2NL67 630 aa13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 KDELC2Q7Z4H8 507 aa13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 SFTPA2Q8IWL1 248 aa13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 BMPERQ8N8U9 685 aa13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 RCBTB1Q8NDN9 531 aa13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 JPH3Q8WXH2 748 aaPredicted RBP13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 PPP1R2P1Q96PQ5 205 aa13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 PLEKHG4BQ96PX9 1271 aa13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 RIOK2Q9BVS4 552 aaKnown RBP13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 TMEM168Q9H0V1 697 aa13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 DPEP2Q9H4A9 486 aa13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 PDP2Q9P2J9 529 aa13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 CD84Q9UIB8 345 aa13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 TMPRSS11EQ9UL52 423 aa13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 AAR2Q9Y312 384 aaKnown RBP13.49□□□□□ -0.25
SCAMP4-206ENST00000460767 NBASA2RRP1 2371 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 PRR19A6NJB7 356 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 PDE2AO00408 941 aaPredicted RBP13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 FANCGO15287 622 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 ZSCAN12O43309 604 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 AGTP01019 485 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 FGGP02679 453 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 IVLP07476 585 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 MAP4P27816 1152 aaKnown RBP13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 CD1CP29017 333 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 OLIG2Q13516 323 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 SEPT6Q14141 434 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 TCEA2Q15560 299 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 DCAF12Q5T6F0 453 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 DENND2CQ68D51 928 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 PDPK2PQ6A1A2 396 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 TCTN3Q6NUS6 607 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 NLGN4XQ8N0W4 816 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 PAF1Q8N7H5 531 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 PRELID2Q8N945 189 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 GLIS1Q8NBF1 620 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 IPMKQ8NFU5 416 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 NLGN4YQ8NFZ3 816 aaPredicted RBP13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 C1orf54Q8WWF1 131 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 ART4Q93070 314 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 KIAA1143Q96AT1 154 aaPredicted RBP13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 FERMT1Q9BQL6 677 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 FAM83DQ9H4H8 585 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 GPN2Q9H9Y4 310 aaPredicted RBP13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 MRPL40Q9NQ50 206 aaKnown RBP13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 ZNF71Q9NQZ8 489 aaPredicted RBP13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 PHPT1Q9NRX4 125 aaPredicted RBP13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 PKD2L2Q9NZM6 624 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 HACD3Q9P035 362 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 PYCARDQ9ULZ3 195 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 SHOC2Q9UQ13 582 aa13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 DRG1Q9Y295 367 aaKnown RBP13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 PCYT1BQ9Y5K3 369 aaPredicted RBP13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 SPTAN1Q13813 2472 aaKnown RBP13.48□□□□□ -0.25
SCAMP4-206ENST00000460767 ICE1Q9Y2F5 2266 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 PRSS38A1L453 326 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 AGAP14A8MT82 685 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 F5H423 210 aaPredicted RBP13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 CES2O00748 559 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 DNAJC6O75061 913 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 STK10O94804 968 aaKnown RBP13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 SUN1O94901 812 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 AP2A1O95782 977 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 OAS2P29728 719 aaKnown RBP13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 CXCR5P32302 372 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 CSTF2P33240 577 aaKnown RBP eCLIP13.47□□□□□ -0.256e-8■□□□□ 9.6
SCAMP4-206ENST00000460767 ABHD18Q0P651 414 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 PEX6Q13608 980 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 MAP7Q14244 749 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 CYP1B1Q16678 543 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 RAET1GQ6H3X3 334 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 NRROSQ86YC3 692 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 SLC35F6Q8N357 371 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 TRAM1L1Q8N609 369 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 CCL4L1Q8NHW4 92 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 CCHCR1Q8TD31 782 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 VPS35Q96QK1 796 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 ZPBPQ9BS86 351 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 ZSCAN5AQ9BUG6 496 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 GSDMCQ9BYG8 508 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 TRIT1Q9H3H1 467 aaKnown RBP13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 CUEDC1Q9NWM3 386 aaPredicted RBP13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 TRNAU1APQ9NX07 287 aaKnown RBP13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 VPS18Q9P253 973 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 FEZ2Q9UHY8 353 aaPredicted RBP13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 NEU2Q9Y3R4 380 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 TMEM184BQ9Y519 407 aaPredicted RBP13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 KCTD3Q9Y597 815 aa13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 OAS3Q9Y6K5 1087 aaKnown RBP13.47□□□□□ -0.25
SCAMP4-206ENST00000460767 SPTBN1Q01082 2364 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms