RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 VPS35Q96QK1 796 aa12.96□□□□□ -0.33
SRRT-206ENST00000460194 ADGRE3Q9BY15 652 aa12.96□□□□□ -0.33
SRRT-206ENST00000460194 ACTL8Q9H568 366 aa12.96□□□□□ -0.33
SRRT-206ENST00000460194 SHOC2Q9UQ13 582 aa12.96□□□□□ -0.33
SRRT-206ENST00000460194 DNAJC16Q9Y2G8 782 aa12.96□□□□□ -0.33
SRRT-206ENST00000460194 SPO11Q9Y5K1 396 aa12.96□□□□□ -0.33
SRRT-206ENST00000460194 DOPEY1Q5JWR5 2465 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 A0A1W2PQJ5 194 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 PIPSLA2A3N6 862 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 KATNA1O75449 491 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 CEACAM4O75871 244 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 MX2P20592 715 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 GNLYP22749 145 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 NOP2P46087 812 aaKnown RBP12.95□□□□□ -0.34
SRRT-206ENST00000460194 IL10RAQ13651 578 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 IQCB1Q15051 598 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 SLC14A2Q15849 920 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 SEPT7Q16181 437 aaKnown RBP12.95□□□□□ -0.34
SRRT-206ENST00000460194 HADHQ16836 314 aaKnown RBP12.95□□□□□ -0.34
SRRT-206ENST00000460194 UGT8Q16880 541 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 INSCQ1MX18 579 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 TDRD12Q587J7 1177 aaKnown RBP12.95□□□□□ -0.34
SRRT-206ENST00000460194 FAM199XQ6PEV8 388 aaPredicted RBP12.95□□□□□ -0.34
SRRT-206ENST00000460194 CERS6Q6ZMG9 384 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 FAM92BQ6ZTR7 304 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 ATCAYQ86WG3 371 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 KCTD6Q8NC69 237 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 GPR150Q8NGU9 434 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 DTX3LQ8TDB6 740 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 ADAMTS17Q8TE56 1095 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 ZDHHC12Q96GR4 267 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 OLFM3Q96PB7 478 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 RNF157Q96PX1 679 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 TWSG1Q9GZX9 223 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 LRRC4CQ9HCJ2 640 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 PLEKHB1Q9UF11 243 aaPredicted RBP12.95□□□□□ -0.34
SRRT-206ENST00000460194 LNPEPQ9UIQ6 1025 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 ZNF711Q9Y462 761 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 MAP4K5Q9Y4K4 846 aa12.95□□□□□ -0.34
SRRT-206ENST00000460194 PCDHGA9Q9Y5G4 932 aaKnown RBP12.95□□□□□ -0.34
SRRT-206ENST00000460194 BZW2Q9Y6E2 419 aaKnown RBP12.95□□□□□ -0.34
SRRT-206ENST00000460194 SEMA7AO75326 666 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 RASSF9O75901 435 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 MTA2O94776 668 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 PROSCO94903 275 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 CDK14O94921 469 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 MT-ND3P03897 115 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 SERPING1P05155 500 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 CCNYL3P0C7X3 344 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 IDSP22304 550 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 FECHP22830 423 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 KDELR1P24390 212 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 PTPN4P29074 926 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 RPS18P62269 152 aaKnown RBP12.94□□□□□ -0.34
SRRT-206ENST00000460194 DMPKQ09013 629 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 TMEM115Q12893 351 aaPredicted RBP12.94□□□□□ -0.34
SRRT-206ENST00000460194 KCNAB1Q14722 419 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 NADK2Q4G0N4 442 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 ATP13A5Q4VNC0 1218 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 CPZQ66K79 652 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 SLC9A4Q6AI14 798 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 ALKBH5Q6P6C2 394 aaKnown RBP12.94□□□□□ -0.34
SRRT-206ENST00000460194 TRIM48Q8IWZ4 208 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 SLC38A9Q8NBW4 561 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 GPR87Q9BY21 358 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 CEP41Q9BYV8 373 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 RAD18Q9NS91 495 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 HAUS2Q9NVX0 235 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 TMEM63CQ9P1W3 806 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 LRBAP50851 2863 aa12.94□□□□□ -0.34
SRRT-206ENST00000460194 PDZK1P1A8MUH7 402 aa12.93□□□□□ -0.34
SRRT-206ENST00000460194 ZNF487B1APH4 448 aa12.93□□□□□ -0.34
SRRT-206ENST00000460194 GAPDHSO14556 408 aaPredicted RBP12.93□□□□□ -0.34
SRRT-206ENST00000460194 MT-CYBP00156 380 aaPredicted RBP12.93□□□□□ -0.34
SRRT-206ENST00000460194 LPOP22079 712 aaPredicted RBP12.93□□□□□ -0.34
SRRT-206ENST00000460194 HMGCLP35914 325 aa12.93□□□□□ -0.34
SRRT-206ENST00000460194 CDK18Q07002 472 aa12.93□□□□□ -0.34
SRRT-206ENST00000460194 TUBB3Q13509 450 aa12.93□□□□□ -0.34
SRRT-206ENST00000460194 IRGCQ6NXR0 463 aa12.93□□□□□ -0.34
SRRT-206ENST00000460194 FAM83HQ6ZRV2 1179 aaPredicted RBP12.93□□□□□ -0.34
SRRT-206ENST00000460194 BPHLQ86WA6 291 aaPredicted RBP12.93□□□□□ -0.34
SRRT-206ENST00000460194 MAP7D3Q8IWC1 876 aa12.93□□□□□ -0.34
SRRT-206ENST00000460194 D2HGDHQ8N465 521 aa12.93□□□□□ -0.34
SRRT-206ENST00000460194 Q8NA96 180 aa12.93□□□□□ -0.34
SRRT-206ENST00000460194 CCNYQ8ND76 341 aa12.93□□□□□ -0.34
SRRT-206ENST00000460194 SPATA22Q8NHS9 363 aa12.93□□□□□ -0.34
SRRT-206ENST00000460194 THAP4Q8WY91 577 aa12.93□□□□□ -0.34
SRRT-206ENST00000460194 UBXN4Q92575 508 aa12.93□□□□□ -0.34
SRRT-206ENST00000460194 MAP3K3Q99759 626 aa12.93□□□□□ -0.34
SRRT-206ENST00000460194 XPO4Q9C0E2 1151 aaKnown RBP12.93□□□□□ -0.34
SRRT-206ENST00000460194 SLC25A51Q9H1U9 297 aa12.93□□□□□ -0.34
SRRT-206ENST00000460194 PDE7BQ9NP56 450 aa12.93□□□□□ -0.34
SRRT-206ENST00000460194 IL26Q9NPH9 171 aa12.93□□□□□ -0.34
SRRT-206ENST00000460194 RARRES3Q9UL19 164 aa12.93□□□□□ -0.34
SRRT-206ENST00000460194 PIKFYVEQ9Y2I7 2098 aa12.93□□□□□ -0.34
SRRT-206ENST00000460194 LOC285095A0A1B0GVY8 99 aa12.92□□□□□ -0.34
SRRT-206ENST00000460194 EBLN1P0CF75 366 aa12.92□□□□□ -0.34
SRRT-206ENST00000460194 GJC1P36383 396 aa12.92□□□□□ -0.34
SRRT-206ENST00000460194 SSR1P43307 286 aaKnown RBP12.92□□□□□ -0.34
SRRT-206ENST00000460194 GPS2Q13227 327 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms