RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 OR7D4Q8NG98 312 aa8.75□□□□□ -1.01
HDAC3-202ENST00000459727 OR52E4Q8NGH9 312 aa8.75□□□□□ -1.01
HDAC3-202ENST00000459727 CD200R1Q8TD46 325 aa8.75□□□□□ -1.01
HDAC3-202ENST00000459727 UBTD2Q8WUN7 234 aa8.75□□□□□ -1.01
HDAC3-202ENST00000459727 LINC01599Q8WXQ3 324 aa8.75□□□□□ -1.01
HDAC3-202ENST00000459727 NMD3Q96D46 503 aaKnown RBP8.75□□□□□ -1.01
HDAC3-202ENST00000459727 NRBF2Q96F24 287 aa8.75□□□□□ -1.01
HDAC3-202ENST00000459727 MAGED4Q96JG8 741 aa8.75□□□□□ -1.01
HDAC3-202ENST00000459727 NSMCE2Q96MF7 247 aa8.75□□□□□ -1.01
HDAC3-202ENST00000459727 FAM126AQ9BYI3 521 aaPredicted RBP8.75□□□□□ -1.01
HDAC3-202ENST00000459727 SLC29A3Q9BZD2 475 aa8.75□□□□□ -1.01
HDAC3-202ENST00000459727 CLPBQ9H078 707 aa8.75□□□□□ -1.01
HDAC3-202ENST00000459727 MUC3BQ9H195 1237 aa8.75□□□□□ -1.01
HDAC3-202ENST00000459727 TUBB1Q9H4B7 451 aa8.75□□□□□ -1.01
HDAC3-202ENST00000459727 CCSER2Q9H7U1 834 aa8.75□□□□□ -1.01
HDAC3-202ENST00000459727 FBRSL1Q9HCM7 1045 aaKnown RBP8.75□□□□□ -1.01
HDAC3-202ENST00000459727 SEMA4BQ9NPR2 832 aaPredicted RBP8.75□□□□□ -1.01
HDAC3-202ENST00000459727 DDX18Q9NVP1 670 aaKnown RBP8.75□□□□□ -1.01
HDAC3-202ENST00000459727 CMTM6Q9NX76 183 aa8.75□□□□□ -1.01
HDAC3-202ENST00000459727 AFF4Q9UHB7 1163 aaKnown RBP8.75□□□□□ -1.01
HDAC3-202ENST00000459727 EIF3LQ9Y262 564 aaKnown RBP8.75□□□□□ -1.01
HDAC3-202ENST00000459727 ZNF510Q9Y2H8 683 aa8.75□□□□□ -1.01
HDAC3-202ENST00000459727 MYLKQ15746 1914 aa8.75□□□□□ -1.01
HDAC3-202ENST00000459727 DOCK4Q8N1I0 1966 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 A0A0D9SEW6 157 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 A0A1W2PQ67 120 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 C7orf72A4D263 438 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 EME2A4GXA9 379 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-202ENST00000459727 ANKRD33BA6NCL7 494 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 ZNF840PA6NDX5 716 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 F8W810 466 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 H3BNC9 293 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 PITPNM1O00562 1244 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 CCL22O00626 93 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 INPP4BO15327 924 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 B4GALT3O60512 393 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 DNAJB5O75953 348 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 CSPG5O95196 566 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 KCNH1O95259 989 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 TSPAN12O95859 305 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 TBX18O95935 607 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 GLUD1P00367 558 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 ALBP02768 609 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 ACPPP15309 386 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 IL1RNP18510 177 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 MAPK1P28482 360 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 CCND3P30281 292 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-202ENST00000459727 HMOX2P30519 316 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 CORO1AP31146 461 aaKnown RBP8.74□□□□□ -1.01
HDAC3-202ENST00000459727 SLC6A4P31645 630 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 HMGCLP35914 325 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 CAPGP40121 348 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 RPS9P46781 194 aaKnown RBP8.74□□□□□ -1.01
HDAC3-202ENST00000459727 SLC11A1P49279 550 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 RPS6KA3P51812 740 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 HNRNPFP52597 415 aaKnown RBP8.74□□□□□ -1.01
HDAC3-202ENST00000459727 ATXN3P54252 364 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-202ENST00000459727 RHOAP61586 193 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 PLOD1Q02809 727 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-202ENST00000459727 ZNF33BQ06732 778 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 DUSP4Q13115 394 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 PLD1Q13393 1074 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 DCTN2Q13561 401 aaKnown RBP8.74□□□□□ -1.01
HDAC3-202ENST00000459727 PWP1Q13610 501 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 IHHQ14623 411 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 ARHGEF6Q15052 776 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 CYTH1Q15438 398 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 TGFBIQ15582 683 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 MYLK3Q32MK0 819 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 SLC36A3Q495N2 470 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 ZBED5Q49AG3 693 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 C6orf136Q5SQH8 315 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 CACHD1Q5VU97 1274 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 PTRHD1Q6GMV3 140 aaKnown RBP8.74□□□□□ -1.01
HDAC3-202ENST00000459727 SULT1C3Q6IMI6 304 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 HMBOX1Q6NT76 420 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 MSANTD1Q6ZTZ1 278 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 LPCAT2Q7L5N7 544 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 SYVN1Q86TM6 617 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 TTC30BQ8N4P2 665 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 CBR4Q8N4T8 237 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 FIBCD1Q8N539 461 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 FAM47BQ8NA70 645 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 FBXO22Q8NEZ5 403 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 GRIN3AQ8TCU5 1115 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 PXYLP1Q8TE99 480 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 MYO19Q96H55 970 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 CASD1Q96PB1 797 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 PLEKHG4BQ96PX9 1271 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 C2orf49Q9BVC5 232 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-202ENST00000459727 GPR63Q9BZJ6 419 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 P2RY12Q9H244 342 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 SEMA6AQ9H2E6 1030 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 CAAP1Q9H8G2 361 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 RDH14Q9HBH5 336 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 SLC52A3Q9NQ40 469 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 STARD7Q9NQZ5 370 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 MARCH5Q9NX47 278 aa8.74□□□□□ -1.01
HDAC3-202ENST00000459727 DUS2Q9NX74 493 aaKnown RBP8.74□□□□□ -1.01
HDAC3-202ENST00000459727 TRPS1Q9UHF7 1281 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms