RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 KRBA2Q6ZNG9 492 aa3.61□□□□□ -1.83
SSX2IP-204ENST00000459708 Q6ZTC4 211 aa3.61□□□□□ -1.83
SSX2IP-204ENST00000459708 DPPA4Q7L190 304 aa3.61□□□□□ -1.83
SSX2IP-204ENST00000459708 SMIM29Q86T20 159 aa3.61□□□□□ -1.83
SSX2IP-204ENST00000459708 SFR1Q86XK3 245 aa3.61□□□□□ -1.83
SSX2IP-204ENST00000459708 TMEM219Q86XT9 240 aa3.61□□□□□ -1.83
SSX2IP-204ENST00000459708 HMGCLL1Q8TB92 370 aa3.61□□□□□ -1.83
SSX2IP-204ENST00000459708 SLC20A1Q8WUM9 679 aa3.61□□□□□ -1.83
SSX2IP-204ENST00000459708 LRRC59Q96AG4 307 aaKnown RBP3.61□□□□□ -1.83
SSX2IP-204ENST00000459708 INTS12Q96CB8 462 aaKnown RBP3.61□□□□□ -1.83
SSX2IP-204ENST00000459708 RHBDF1Q96CC6 855 aa3.61□□□□□ -1.83
SSX2IP-204ENST00000459708 RRNAD1Q96FB5 475 aaKnown RBP3.61□□□□□ -1.83
SSX2IP-204ENST00000459708 CMKLR1Q99788 373 aa3.61□□□□□ -1.83
SSX2IP-204ENST00000459708 SH3GL2Q99962 352 aa3.61□□□□□ -1.83
SSX2IP-204ENST00000459708 LRRCC1Q9C099 1032 aa3.61□□□□□ -1.83
SSX2IP-204ENST00000459708 RANBP17Q9H2T7 1088 aaKnown RBP3.61□□□□□ -1.83
SSX2IP-204ENST00000459708 EVA1AQ9H8M9 152 aa3.61□□□□□ -1.83
SSX2IP-204ENST00000459708 PCDH9Q9HC56 1237 aa3.61□□□□□ -1.83
SSX2IP-204ENST00000459708 HAO1Q9UJM8 370 aa3.61□□□□□ -1.83
SSX2IP-204ENST00000459708 TTC7AQ9ULT0 858 aaPredicted RBP3.61□□□□□ -1.83
SSX2IP-204ENST00000459708 ATP6V1DQ9Y5K8 247 aa3.61□□□□□ -1.83
SSX2IP-204ENST00000459708 ABCA3Q99758 1704 aa3.61□□□□□ -1.83
SSX2IP-204ENST00000459708 COL5A2P05997 1499 aaPredicted RBP3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 A0A1W2PQF6 199 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 EIF3CLB5ME19 914 aaKnown RBP3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 CAMTA2O94983 1202 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 RTN3O95197 1032 aaPredicted RBP3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 CLEC3BP05452 202 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 UMODP07911 640 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 UBTFL1P0CB47 393 aaPredicted RBP3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 AMD1P17707 334 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 CORO1AP31146 461 aaKnown RBP3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 FRG1Q14331 258 aaKnown RBP3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 RRS1Q15050 365 aaKnown RBP3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 CDONQ4KMG0 1287 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 KCNT1Q5JUK3 1230 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 DUS1LQ6P1R4 473 aaKnown RBP3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 C9orf139Q6ZV77 190 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 ZNF329Q86UD4 541 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 SLC9B2Q86UD5 537 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 CERS3Q8IU89 383 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 HSCBQ8IWL3 235 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 DIS3L2Q8IYB7 885 aaKnown RBP3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 ZNF34Q8IZ26 560 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 C1orf87Q8N0U7 546 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 TTC5Q8N0Z6 440 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 ZBTB8BQ8NAP8 495 aaPredicted RBP3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 ACVR1CQ8NER5 493 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 LNX1Q8TBB1 728 aaPredicted RBP3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 DNAAF4Q8WXU2 420 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 ABTB1Q969K4 478 aaPredicted RBP3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 IGSF8Q969P0 613 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 ORAI1Q96D31 301 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 MMABQ96EY8 250 aaPredicted RBP3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 ACOX2Q99424 681 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 STRA6Q9BX79 667 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 SLC26A6Q9BXS9 759 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 ACSS1Q9NUB1 689 aaPredicted RBP3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 CHMP5Q9NZZ3 219 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 HMG20BQ9P0W2 317 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 ZNF112Q9UJU3 913 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 AMDHD2Q9Y303 409 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 KIF3AQ9Y496 699 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 LOXL2Q9Y4K0 774 aa3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 PDS5AQ29RF7 1337 aaKnown RBP3.6□□□□□ -1.83
SSX2IP-204ENST00000459708 STRCQ7RTU9 1775 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 FAM237AA0A1B0GTK4 181 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 AKR1B15C9JRZ8 316 aaPredicted RBP3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 KRT36O76013 467 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 HMOX1P09601 288 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 ELF1P32519 619 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 ZNF132P52740 706 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 RPL7AP62424 266 aaKnown RBP3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 CSNK2A1P68400 391 aaPredicted RBP3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 MPP1Q00013 466 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 ARL16Q0P5N6 197 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 OLIG2Q13516 323 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 KRT32Q14532 448 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 KRT24Q2M2I5 525 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 C9orf50Q5SZB4 431 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 C20orf194Q5TEA3 1177 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 FRG2Q64ET8 278 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 ZNF790Q6PG37 636 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 CYP20A1Q6UW02 462 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 MEX3BQ6ZN04 569 aaKnown RBP3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 USP43Q70EL4 1123 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 BEST3Q8N1M1 668 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 MUC20Q8N307 709 aaPredicted RBP3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 FBXL16Q8N461 479 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 TMEM116Q8NCL8 245 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 CCDC191Q8NCU4 936 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 CSNK2A3Q8NEV1 391 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 OR14L1PQ8NHC6 308 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 DNASE2BQ8WZ79 361 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 TTC14Q96N46 770 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 NODALQ96S42 347 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 PCGF1Q9BSM1 259 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 ALDH8A1Q9H2A2 487 aaPredicted RBP3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 POLR1BQ9H9Y6 1135 aa3.59□□□□□ -1.83
SSX2IP-204ENST00000459708 PLEKHA5Q9HAU0 1116 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms