RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 OR2T3Q8NH03 318 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 IPO13O94829 963 aaKnown RBP19.49■□□□□ 0.71
SNX27-204ENST00000458013 FGF1P05230 155 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 MMP3P08254 477 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 PRKCHP24723 683 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 S100GP29377 79 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 SLC16A10Q8TF71 515 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 SAMD4AQ9UPU9 718 aaKnown RBP19.49■□□□□ 0.71
SNX27-204ENST00000458013 BAZ2BQ9UIF8 2168 aaKnown RBP19.49■□□□□ 0.71
SNX27-204ENST00000458013 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.49■□□□□ 0.71
SNX27-204ENST00000458013 SEPT4O43236 478 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 OR4F21O95013 312 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 C2P06681 752 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 CCR3P51677 355 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 TXNL4AP83876 142 aaKnown RBP19.49■□□□□ 0.71
SNX27-204ENST00000458013 CLEC4CQ8WTT0 213 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 MFSD3Q96ES6 412 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 IDI2Q9BXS1 227 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 LRRC72A6NJI9 287 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 QSOX1O00391 747 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 DHX15O43143 795 aaKnown RBP19.49■□□□□ 0.71
SNX27-204ENST00000458013 ATG13O75143 517 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 UROSP10746 265 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 PTNP21246 168 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 CYP2C18P33260 490 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 ATP6V0D1P61421 351 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 OTOP2Q7RTS6 562 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 ZNF554Q86TJ5 538 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 OR7D4Q8NG98 312 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 FAM129BQ96TA1 746 aa19.49■□□□□ 0.71
SNX27-204ENST00000458013 ALOX15BO15296 676 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 PTPN9P43378 593 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 ENPEPQ07075 957 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 SP140Q13342 867 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 RTL4Q6ZR62 310 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 OR10A6Q8NH74 314 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 SHC3Q92529 594 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 SORCS3Q9UPU3 1222 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 H7C0S8 307 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 TREHO43280 583 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 MTTPP55157 894 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 SLC4A11Q8NBS3 891 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 OR51V1Q9H2C8 321 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 COMMD3-BMI1R4GMX3 469 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 ADH1CP00326 375 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 ANXA4P09525 319 aaPredicted RBP19.48■□□□□ 0.71
SNX27-204ENST00000458013 NR2F6P10588 404 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 AHCYP23526 432 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 RPL3P39023 403 aaKnown RBP19.48■□□□□ 0.71
SNX27-204ENST00000458013 DGKEP52429 567 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 IDNKQ5T6J7 187 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 ECHDC2Q86YB7 292 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 CRYBG2Q8N1P7 616 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 SLIT1O75093 1534 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 GRIN2DO15399 1336 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 MYBPC3Q14896 1274 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 SWI5Q1ZZU3 235 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 LRRC38Q5VT99 294 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 CHST15Q7LFX5 561 aaPredicted RBP19.48■□□□□ 0.71
SNX27-204ENST00000458013 FAM13CQ8NE31 585 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 IRAK3Q9Y616 596 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 PIP5K1BO14986 540 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 MTPNP58546 118 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 SH3PXD2AQ5TCZ1 1133 aa19.48■□□□□ 0.71
SNX27-204ENST00000458013 CYP3A7-CYP3A51PA0A087WV96 503 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 RGS10O43665 173 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 PRAMEF1O95521 474 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 CYP3A7P24462 503 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 GRM5P41594 1212 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 MAP2K5Q13163 448 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 CLP1Q92989 425 aaKnown RBP19.47■□□□□ 0.71
SNX27-204ENST00000458013 TNFRSF25Q93038 417 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 OXCT2Q9BYC2 517 aaPredicted RBP19.47■□□□□ 0.71
SNX27-204ENST00000458013 NECTIN3Q9NQS3 549 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 CKLFQ9UBR5 152 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 IFI30P13284 250 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 HOXB8P17481 243 aaPredicted RBP19.47■□□□□ 0.71
SNX27-204ENST00000458013 RHBDL3P58872 404 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 ADAM17P78536 824 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 SLC8B1Q6J4K2 584 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 TEFMQ96QE5 360 aaKnown RBP19.47■□□□□ 0.71
SNX27-204ENST00000458013 AIF1LQ9BQI0 150 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 DNAJC11Q9NVH1 559 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 TSPAN9O75954 239 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 GLUD1P00367 558 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 NOMO1Q15155 1222 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 OR2L3Q8NG85 312 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 ACMSDQ8TDX5 336 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 MFSD14AQ96MC6 490 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 CLCC1Q96S66 551 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 FSCN2O14926 492 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 IDH3AP50213 366 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 ZFP69Q49AA0 526 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 FAM46CQ5VWP2 391 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 ESRP1Q6NXG1 681 aaKnown RBP19.47■□□□□ 0.71
SNX27-204ENST00000458013 TTPALQ9BTX7 342 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 ZNF221Q9UK13 617 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 PEX2P28328 305 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 LINGO2Q7L985 606 aa19.47■□□□□ 0.71
SNX27-204ENST00000458013 ARMC10Q8N2F6 343 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms