RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 SORT1Q99523 831 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 C19orf43Q9BQ61 176 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 GATA5Q9BWX5 397 aaPredicted RBP8.62□□□□□ -1.03
RIF1-208ENST00000457745 ALG9Q9H6U8 611 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 CYP4F12Q9HCS2 524 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 SARS2Q9NP81 518 aaKnown RBP8.62□□□□□ -1.03
RIF1-208ENST00000457745 PSD3Q9NYI0 1048 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 COPG2Q9UBF2 871 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 APPL1Q9UKG1 709 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 PNMA8BQ9ULN7 279 aaPredicted RBP8.62□□□□□ -1.03
RIF1-208ENST00000457745 SORCS3Q9UPU3 1222 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 CDYLQ9Y232 598 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 ANKRD6Q9Y2G4 727 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 TMEM98Q9Y2Y6 226 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 ACOT9Q9Y305 439 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 PRKAB1Q9Y478 270 aa8.62□□□□□ -1.03
RIF1-208ENST00000457745 ZFC3H1O60293 1989 aaKnown RBP8.61□□□□□ -1.03
RIF1-208ENST00000457745 A0A087X1B8 175 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 GMNCA6NCL1 334 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 A8MT66 165 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 H0Y858 1186 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 H0Y8X5 98 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 UBXN8O00124 270 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 PSMD11O00231 422 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 PPP6CO00743 305 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 TSPAN6O43657 245 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 AP1G1O43747 822 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 LZTS3O60299 673 aaPredicted RBP8.61□□□□□ -1.03
RIF1-208ENST00000457745 EDF1O60869 148 aaKnown RBP8.61□□□□□ -1.03
RIF1-208ENST00000457745 PCDH8O95206 1070 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 SLC25A14O95258 325 aaPredicted RBP8.61□□□□□ -1.03
RIF1-208ENST00000457745 TRIM16O95361 564 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 ESR1P03372 595 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 CHRNGP07510 517 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 LTA4HP09960 611 aaKnown RBP8.61□□□□□ -1.03
RIF1-208ENST00000457745 ZNF8P17098 575 aaPredicted RBP8.61□□□□□ -1.03
RIF1-208ENST00000457745 CRABP2P29373 138 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 TPMTP51580 245 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 ADARP55265 1226 aaKnown RBP8.61□□□□□ -1.03
RIF1-208ENST00000457745 CLDN2P57739 230 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 STARD6P59095 220 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 OCRLQ01968 901 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 ELP6Q0PNE2 266 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 ITGA9Q13797 1035 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 ITIH4Q14624 930 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 UBXN2BQ14CS0 331 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 PHKG1Q16816 387 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 INSCQ1MX18 579 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 PLA2G4EQ3MJ16 856 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 GPR33Q49SQ1 333 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 TAF1BQ53T94 588 aaPredicted RBP8.61□□□□□ -1.03
RIF1-208ENST00000457745 FAM46CQ5VWP2 391 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 RAET1GQ6H3X3 334 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 MBOAT1Q6ZNC8 495 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 FAM83HQ6ZRV2 1179 aaPredicted RBP8.61□□□□□ -1.03
RIF1-208ENST00000457745 RGS9BPQ6ZS82 235 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 DSG4Q86SJ6 1040 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 LMNTD1Q8N9Z9 388 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 OR14C36Q8NHC7 312 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 RFWD2Q8NHY2 731 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 CXorf40AQ8TE69 158 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 RLN3Q8WXF3 142 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 LINGO1Q96FE5 620 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 SIPA1Q96FS4 1042 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 PRR11Q96HE9 360 aaPredicted RBP8.61□□□□□ -1.03
RIF1-208ENST00000457745 PPP1R16AQ96I34 528 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 COX14Q96I36 57 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 SCYL1Q96KG9 808 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 TMEM237Q96Q45 408 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 CCT8L2Q96SF2 557 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 COPS8Q99627 209 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 C1QTNF2Q9BXJ5 285 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 TPSD1Q9BZJ3 242 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 EPN3Q9H201 632 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 TBC1D17Q9HA65 648 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 NMRAL1Q9HBL8 299 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 TM7SF3Q9NS93 570 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 ATXN10Q9UBB4 475 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 FAM8A1Q9UBU6 413 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 DCDC2Q9UHG0 476 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 INVSQ9Y283 1065 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 DHRS7Q9Y394 339 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 PLEKHM1Q9Y4G2 1056 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 PCDHB3Q9Y5E6 796 aa8.61□□□□□ -1.03
RIF1-208ENST00000457745 FAM170BA6NMN3 283 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 NEMP1O14524 444 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 NPC1O15118 1278 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 PI15O43692 258 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 SNNO75324 88 aaPredicted RBP8.6□□□□□ -1.03
RIF1-208ENST00000457745 VPS26AO75436 327 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 SIX3O95343 332 aaPredicted RBP8.6□□□□□ -1.03
RIF1-208ENST00000457745 PAK4O96013 591 aaPredicted RBP8.6□□□□□ -1.03
RIF1-208ENST00000457745 GSTA1P08263 222 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 CPA3P15088 417 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 TSPAN8P19075 237 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 CHRM3P20309 590 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 MPSTP25325 297 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 AOAHP28039 575 aa8.6□□□□□ -1.03
RIF1-208ENST00000457745 PBLDP30039 288 aaPredicted RBP8.6□□□□□ -1.03
RIF1-208ENST00000457745 AKT1P31749 480 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms