RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 CLCNKBP51801 687 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 RAP1GDS1P52306 607 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 ARHGDIAP52565 204 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 SEC24CP53992 1094 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 CDH6P55285 790 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 EIF3BP55884 814 aaKnown RBP5.39□□□□□ -1.55
VPS41-209ENST00000457055 GPX6P59796 221 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 UBE2HP62256 183 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 YWHAEP62258 255 aaKnown RBP5.39□□□□□ -1.55
VPS41-209ENST00000457055 LACTBP83111 547 aaPredicted RBP5.39□□□□□ -1.55
VPS41-209ENST00000457055 KIF23Q02241 960 aaPredicted RBP5.39□□□□□ -1.55
VPS41-209ENST00000457055 LCP2Q13094 533 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 NOGQ13253 232 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 PCGF3Q3KNV8 242 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 GLE1Q53GS7 698 aaKnown RBP5.39□□□□□ -1.55
VPS41-209ENST00000457055 ZNF628Q5EBL2 1059 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 ZRANB3Q5FWF4 1079 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 HERC4Q5GLZ8 1057 aaPredicted RBP5.39□□□□□ -1.55
VPS41-209ENST00000457055 C9orf152Q5JTZ5 239 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 STRIP1Q5VSL9 837 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 IL23RQ5VWK5 629 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 HEPHL1Q6MZM0 1159 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 FBXO38Q6PIJ6 1188 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 SUSD1Q6UWL2 747 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 USP49Q70CQ1 688 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 ZNF554Q86TJ5 538 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 LONP2Q86WA8 852 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 COL23A1Q86Y22 540 aaPredicted RBP5.39□□□□□ -1.55
VPS41-209ENST00000457055 CLEC4FQ8N1N0 589 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 ARHGAP18Q8N392 663 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 ARFGAP1Q8N6T3 406 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 AMER2Q8N7J2 671 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 RAB3IL1Q8TBN0 382 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 FAM71BQ8TC56 605 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 DQX1Q8TE96 717 aaKnown RBP5.39□□□□□ -1.55
VPS41-209ENST00000457055 PAQR8Q8TEZ7 354 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 NT5C3BQ969T7 300 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 ISG20Q96AZ6 181 aaKnown RBP5.39□□□□□ -1.55
VPS41-209ENST00000457055 CEP170P1Q96L14 293 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 BBS4Q96RK4 519 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 MMS19Q96T76 1030 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 TSC22D3Q99576 134 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 IMPG2Q9BZV3 1241 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 POLR1EQ9GZS1 481 aaKnown RBP5.39□□□□□ -1.55
VPS41-209ENST00000457055 OR51V1Q9H2C8 321 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 TMEM245Q9H330 911 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 ZNF287Q9HBT7 754 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 SMURF1Q9HCE7 757 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 NRBP2Q9NSY0 501 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 HCFC1R1Q9NWW0 138 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 CYP39A1Q9NYL5 469 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 PLA2G3Q9NZ20 509 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 NDUFA13Q9P0J0 144 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 Q9UFV3 132 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 INTS6Q9UL03 887 aaKnown RBP5.39□□□□□ -1.55
VPS41-209ENST00000457055 OGDHLQ9ULD0 1010 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 MTMR6Q9Y217 621 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 TBC1D30Q9Y2I9 924 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 FADS3Q9Y5Q0 445 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 COPG1Q9Y678 874 aaKnown RBP5.39□□□□□ -1.55
VPS41-209ENST00000457055 PNPLA7Q6ZV29 1317 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 DHX57Q6P158 1386 aaKnown RBP5.39□□□□□ -1.55
VPS41-209ENST00000457055 OVOS2A0A0G2JMS6 1433 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 OVOS2A0A0J9YW53 1432 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 OVOS2Q6IE36 1432 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 SSH2Q76I76 1423 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 CCDC88AQ3V6T2 1871 aa5.39□□□□□ -1.55
VPS41-209ENST00000457055 CASP8AP2Q9UKL3 1982 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 LRRC37A3O60309 1634 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 QSER1Q2KHR3 1735 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 N4BP2Q86UW6 1770 aaPredicted RBP5.38□□□□□ -1.55
VPS41-209ENST00000457055 A0A1W2PN81 502 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 A0A1W2PPC4 97 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 GSTTP1A0A1W2PQM5 241 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 TYW5A2RUC4 315 aaKnown RBP5.38□□□□□ -1.55
VPS41-209ENST00000457055 ERVV-2B6SEH9 535 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 HNRNPDLO14979 420 aaKnown RBP5.38□□□□□ -1.55
VPS41-209ENST00000457055 SYN3O14994 580 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 LRRTM2O43300 516 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 ENTPD3O75355 529 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 ZNF821O75541 412 aaPredicted RBP5.38□□□□□ -1.55
VPS41-209ENST00000457055 PDE5AO76074 875 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 PGLSO95336 258 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 CHEK2O96017 543 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 PDGFBP01127 241 aaPredicted RBP5.38□□□□□ -1.55
VPS41-209ENST00000457055 SAT1P21673 171 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 C5AR1P21730 350 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 HNRNPA2B1P22626 353 aaKnown RBP5.38□□□□□ -1.55
VPS41-209ENST00000457055 CPT2P23786 658 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 ADRA1DP25100 572 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 TNFRSF8P28908 595 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 CHRNA7P36544 502 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 ALDH3B1P43353 468 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 KRT6CP48668 564 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 SLC9A3P48764 834 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 SLC11A2P49281 568 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 LBX1P52954 281 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 RPS8P62241 208 aaKnown RBP5.38□□□□□ -1.55
VPS41-209ENST00000457055 SPIBQ01892 262 aa5.38□□□□□ -1.55
VPS41-209ENST00000457055 HHEXQ03014 270 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms