RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 WASH6PQ9NQA3 447 aa22.81■■□□□ 1.24
CBX3-204ENST00000456948 EIF2B3Q9NR50 452 aaKnown RBP22.81■■□□□ 1.24
CBX3-204ENST00000456948 THSD1Q9NS62 852 aa22.81■■□□□ 1.24
CBX3-204ENST00000456948 CPNE7Q9UBL6 633 aa22.81■■□□□ 1.24
CBX3-204ENST00000456948 SATB2Q9UPW6 733 aa22.81■■□□□ 1.24
CBX3-204ENST00000456948 PCDHGA8Q9Y5G5 932 aa22.81■■□□□ 1.24
CBX3-204ENST00000456948 URB1O60287 2271 aaKnown RBP22.8■■□□□ 1.24
CBX3-204ENST00000456948 FREM2Q5SZK8 3169 aa22.8■■□□□ 1.24
CBX3-204ENST00000456948 PGRMC1O00264 195 aaKnown RBP22.8■■□□□ 1.24
CBX3-204ENST00000456948 RRP8O43159 456 aaKnown RBP22.8■■□□□ 1.24
CBX3-204ENST00000456948 DUX1O43812 170 aa22.8■■□□□ 1.24
CBX3-204ENST00000456948 XRCC1P18887 633 aaPredicted RBP22.8■■□□□ 1.24
CBX3-204ENST00000456948 ADRA1DP25100 572 aa22.8■■□□□ 1.24
CBX3-204ENST00000456948 ERVPABLB-1P60509 514 aa22.8■■□□□ 1.24
CBX3-204ENST00000456948 XIAPP98170 497 aa22.8■■□□□ 1.24
CBX3-204ENST00000456948 CACNG1Q06432 222 aa22.8■■□□□ 1.24
CBX3-204ENST00000456948 AGAP9Q5VTM2 703 aa22.8■■□□□ 1.24
CBX3-204ENST00000456948 ABRAXAS1Q6UWZ7 409 aa22.8■■□□□ 1.24
CBX3-204ENST00000456948 USP53Q70EK8 1073 aa22.8■■□□□ 1.24
CBX3-204ENST00000456948 TAS2R42Q7RTR8 314 aa22.8■■□□□ 1.24
CBX3-204ENST00000456948 RBM12BQ8IXT5 1001 aaKnown RBP22.8■■□□□ 1.24
CBX3-204ENST00000456948 NXPE1Q8N323 547 aa22.8■■□□□ 1.24
CBX3-204ENST00000456948 CDKN2AIPNLQ96HQ2 116 aa22.8■■□□□ 1.24
CBX3-204ENST00000456948 CMKLR1Q99788 373 aa22.8■■□□□ 1.24
CBX3-204ENST00000456948 SLC23A2Q9UGH3 650 aa22.8■■□□□ 1.24
CBX3-204ENST00000456948 RALYQ9UKM9 306 aaKnown RBP22.8■■□□□ 1.24
CBX3-204ENST00000456948 ATXN7L1Q9ULK2 861 aaPredicted RBP22.8■■□□□ 1.24
CBX3-204ENST00000456948 CFAP47Q6ZTR5 3102 aa22.8■■□□□ 1.24
CBX3-204ENST00000456948 ZZEF1O43149 2961 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 A6NCN8 305 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 OR2AG2A6NM03 316 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 AGAP14A8MT82 685 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 F8W8V4 182 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 CES2O00748 559 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 DXOO77932 396 aaKnown RBP22.79■■□□□ 1.24
CBX3-204ENST00000456948 ZSCAN5DPP0CG00 497 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 KCNJ1P48048 391 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 EPHA4P54764 986 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 CDK16Q00536 496 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 DMPKQ09013 629 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 SQSTM1Q13501 440 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 FNBP1LQ5T0N5 605 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.79■■□□□ 1.24
CBX3-204ENST00000456948 PHF19Q5T6S3 580 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 ZNF449Q6P9G9 518 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 FOXR1Q6PIV2 292 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 IGF2-ASQ6U949 168 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 LRRC69Q6ZNQ3 347 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 RAB11FIP2Q7L804 512 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 FBXO39Q8N4B4 442 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 PRELID2Q8N945 189 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 PPHLN1Q8NEY8 458 aaKnown RBP22.79■■□□□ 1.24
CBX3-204ENST00000456948 CXorf40BQ96DE9 158 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 RANBP9Q96S59 729 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 OSBPL9Q96SU4 736 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 FOXP3Q9BZS1 431 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 CASS4Q9NQ75 786 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 PIH1D1Q9NWS0 290 aaKnown RBP22.79■■□□□ 1.24
CBX3-204ENST00000456948 ZDHHC3Q9NYG2 299 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 ACSL5Q9ULC5 683 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 RIMKLBQ9ULI2 386 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 APC2O95996 2303 aa22.79■■□□□ 1.24
CBX3-204ENST00000456948 IGHV1OR21-1A0A087WYE8 117 aa22.78■■□□□ 1.24
CBX3-204ENST00000456948 MROH6A6NGR9 719 aa22.78■■□□□ 1.24
CBX3-204ENST00000456948 PLD2O14939 933 aa22.78■■□□□ 1.24
CBX3-204ENST00000456948 EML2O95834 649 aa22.78■■□□□ 1.24
CBX3-204ENST00000456948 JMJD7P0C870 316 aa22.78■■□□□ 1.24
CBX3-204ENST00000456948 ATP1B2P14415 290 aaPredicted RBP22.78■■□□□ 1.24
CBX3-204ENST00000456948 CD1CP29017 333 aa22.78■■□□□ 1.24
CBX3-204ENST00000456948 PPARGP37231 505 aaPredicted RBP22.78■■□□□ 1.24
CBX3-204ENST00000456948 ZFP36L1Q07352 338 aaKnown RBP22.78■■□□□ 1.24
CBX3-204ENST00000456948 TRA2AQ13595 282 aaKnown RBP eCLIP22.78■■□□□ 1.242e-11■■■■■ 49.5
CBX3-204ENST00000456948 SEPT7Q16181 437 aaKnown RBP22.78■■□□□ 1.24
CBX3-204ENST00000456948 TBC1D25Q3MII6 688 aa22.78■■□□□ 1.24
CBX3-204ENST00000456948 LYPLAL1Q5VWZ2 237 aa22.78■■□□□ 1.24
CBX3-204ENST00000456948 DET1Q7L5Y6 550 aa22.78■■□□□ 1.24
CBX3-204ENST00000456948 ACTRT1Q8TDG2 376 aa22.78■■□□□ 1.24
CBX3-204ENST00000456948 GRK7Q8WTQ7 553 aa22.78■■□□□ 1.24
CBX3-204ENST00000456948 PEX13Q92968 403 aa22.78■■□□□ 1.24
CBX3-204ENST00000456948 SGF29Q96ES7 293 aa22.78■■□□□ 1.24
CBX3-204ENST00000456948 UCK1Q9HA47 277 aa22.78■■□□□ 1.24
CBX3-204ENST00000456948 BFARQ9NZS9 450 aa22.78■■□□□ 1.24
CBX3-204ENST00000456948 RAXQ9Y2V3 346 aa22.78■■□□□ 1.24
CBX3-204ENST00000456948 MGAT4DA6NG13 374 aa22.77■■□□□ 1.24
CBX3-204ENST00000456948 GPR39O43194 453 aa22.77■■□□□ 1.24
CBX3-204ENST00000456948 TCP1P17987 556 aaKnown RBP22.77■■□□□ 1.24
CBX3-204ENST00000456948 RPL10P27635 214 aaKnown RBP22.77■■□□□ 1.24
CBX3-204ENST00000456948 NPY2RP49146 381 aa22.77■■□□□ 1.24
CBX3-204ENST00000456948 CTSCP53634 463 aa22.77■■□□□ 1.24
CBX3-204ENST00000456948 GSE1Q14687 1217 aa22.77■■□□□ 1.24
CBX3-204ENST00000456948 BCL7AQ4VC05 210 aa22.77■■□□□ 1.24
CBX3-204ENST00000456948 C11orf96Q7Z7L8 435 aa22.77■■□□□ 1.24
CBX3-204ENST00000456948 PRUNE1Q86TP1 453 aa22.77■■□□□ 1.24
CBX3-204ENST00000456948 OR4D9Q8NGE8 314 aa22.77■■□□□ 1.24
CBX3-204ENST00000456948 MS4A14Q96JA4 679 aa22.77■■□□□ 1.24
CBX3-204ENST00000456948 FAM96AQ9H5X1 160 aa22.77■■□□□ 1.24
CBX3-204ENST00000456948 RDH14Q9HBH5 336 aa22.77■■□□□ 1.24
CBX3-204ENST00000456948 POT1Q9NUX5 634 aa22.77■■□□□ 1.24
CBX3-204ENST00000456948 SNX12Q9UMY4 172 aa22.77■■□□□ 1.24
CBX3-204ENST00000456948 QSOX1O00391 747 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms