RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 CPNE7Q9UBL6 633 aa17.79■□□□□ 0.44
PDLIM2-215ENST00000456545 GOLGA6L10A0A0M3HER8 536 aa17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 AP3B1O00203 1094 aa17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 PGRMC1O00264 195 aaKnown RBP17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 ADRA1DP25100 572 aa17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 CA5AP35218 305 aa17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 CTSCP53634 463 aa17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 TERF1P54274 439 aa17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 DRG2P55039 364 aaKnown RBP17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 GPLD1P80108 840 aa17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 CACNG1Q06432 222 aa17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 EIF3IQ13347 325 aaKnown RBP17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 GSE1Q14687 1217 aa17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 NR1D2Q14995 579 aa17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 TRIP13Q15645 432 aaPredicted RBP17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 CLPPQ16740 277 aaPredicted RBP17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 LRRC69Q6ZNQ3 347 aa17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 RAB11FIP2Q7L804 512 aa17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 B3GNT8Q7Z7M8 397 aa17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 NXPE1Q8N323 547 aa17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 FGF11Q92914 225 aa17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 CXorf40BQ96DE9 158 aa17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 OSBPL9Q96SU4 736 aa17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 TTC1Q99614 292 aa17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 DPYSL5Q9BPU6 564 aa17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 AKAP13Q12802 2813 aa17.78■□□□□ 0.44
PDLIM2-215ENST00000456545 SPEGQ15772 3267 aa17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 CHD8Q9HCK8 2581 aa17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 IGHV1OR21-1A0A087WYE8 117 aa17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 RRP8O43159 456 aaKnown RBP17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 DUX1O43812 170 aa17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 JMJD7P0C870 316 aa17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 XRCC1P18887 633 aaPredicted RBP17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 CD1CP29017 333 aa17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 CCKBRP32239 447 aa17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 GRIA1P42261 906 aa17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 VPS41P49754 854 aa17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 GNG11P61952 73 aa17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 SARNPP82979 210 aaKnown RBP17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 ABRAXAS1Q6UWZ7 409 aa17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 NLRP9Q7RTR0 991 aa17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 SERPINA9Q86WD7 417 aa17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 BEND7Q8N7W2 519 aaPredicted RBP17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 PPHLN1Q8NEY8 458 aaKnown RBP17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 LIN37Q96GY3 246 aaPredicted RBP17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 ZNF578Q96N58 590 aaPredicted RBP17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 CMKLR1Q99788 373 aa17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 CASS4Q9NQ75 786 aa17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 THSD1Q9NS62 852 aa17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 ZDHHC3Q9NYG2 299 aa17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 FAM8A1Q9UBU6 413 aa17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 TTC7AQ9ULT0 858 aaPredicted RBP17.77■□□□□ 0.44
PDLIM2-215ENST00000456545 A6NCN8 305 aa17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 MGAT4DA6NG13 374 aa17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 MROH6A6NGR9 719 aa17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 H7C0S8 307 aa17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 PLD2O14939 933 aa17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 TNFSF15O95150 251 aa17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 KRT14P02533 472 aa17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 ATP1B2P14415 290 aaPredicted RBP17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 SESN2P58004 480 aaPredicted RBP17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 TBC1D25Q3MII6 688 aa17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 ZNF449Q6P9G9 518 aa17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 WASH2PQ6VEQ5 465 aa17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 C11orf96Q7Z7L8 435 aa17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 OR6P1Q8NGX9 317 aa17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 COG1Q8WTW3 980 aa17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 NCSTNQ92542 709 aa17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 TMEM159Q96B96 161 aa17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 RANBP9Q96S59 729 aa17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 NUDT22Q9BRQ3 303 aa17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 SEMA6CQ9H3T2 930 aa17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 WASH6PQ9NQA3 447 aa17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 EIF2B3Q9NR50 452 aaKnown RBP17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 BFARQ9NZS9 450 aa17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 SCHIP1Q9P0W5 487 aaPredicted RBP17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 SNX12Q9UMY4 172 aa17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 PSMD13Q9UNM6 376 aa17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 PCDHGA8Q9Y5G5 932 aa17.76■□□□□ 0.43
PDLIM2-215ENST00000456545 CEP295Q9C0D2 2601 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 KLHL33A6NCF5 533 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 AGAP14A8MT82 685 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 AMD1P17707 334 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 TCP1P17987 556 aaKnown RBP17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 ACRV1P26436 265 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 COILP38432 576 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 SLC19A1P41440 591 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 NPY2RP49146 381 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 CDKN1CP49918 316 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 PDX1P52945 283 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 ERVPABLB-1P60509 514 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 PRAMEP78395 509 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 ZFP36L1Q07352 338 aaKnown RBP17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 GPS1Q13098 491 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 NFE2L1Q14494 772 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 PCID2Q5JVF3 399 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 TSTD2Q5T7W7 516 aa17.75■□□□□ 0.43
PDLIM2-215ENST00000456545 AGAP9Q5VTM2 703 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms