RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 DDA1Q9BW61 102 aa17.59■□□□□ 0.41
MSH6-207ENST00000456246 SLC23A2Q9UGH3 650 aa17.59■□□□□ 0.41
MSH6-207ENST00000456246 TMPRSS11EQ9UL52 423 aa17.59■□□□□ 0.41
MSH6-207ENST00000456246 DNMT3AQ9Y6K1 912 aaPredicted RBP17.59■□□□□ 0.41
MSH6-207ENST00000456246 B4E171 279 aa17.58■□□□□ 0.4
MSH6-207ENST00000456246 C9orf172C9J069 976 aa17.58■□□□□ 0.4
MSH6-207ENST00000456246 PRAMEF1O95521 474 aa17.58■□□□□ 0.4
MSH6-207ENST00000456246 FTCDO95954 541 aa17.58■□□□□ 0.4
MSH6-207ENST00000456246 TSPAN7P41732 249 aa17.58■□□□□ 0.4
MSH6-207ENST00000456246 HALP42357 657 aa17.58■□□□□ 0.4
MSH6-207ENST00000456246 CFHR1Q03591 330 aa17.58■□□□□ 0.4
MSH6-207ENST00000456246 DMPKQ09013 629 aa17.58■□□□□ 0.4
MSH6-207ENST00000456246 KLF1Q13351 362 aaPredicted RBP17.58■□□□□ 0.4
MSH6-207ENST00000456246 LONRF2Q1L5Z9 754 aa17.58■□□□□ 0.4
MSH6-207ENST00000456246 P3H1Q32P28 736 aa17.58■□□□□ 0.4
MSH6-207ENST00000456246 AADACL2Q6P093 401 aa17.58■□□□□ 0.4
MSH6-207ENST00000456246 ARHGEF18Q6ZSZ5 1173 aa17.58■□□□□ 0.4
MSH6-207ENST00000456246 AMZ2Q86W34 360 aa17.58■□□□□ 0.4
MSH6-207ENST00000456246 PLXDC1Q8IUK5 500 aa17.58■□□□□ 0.4
MSH6-207ENST00000456246 CCDC110Q8TBZ0 833 aa17.58■□□□□ 0.4
MSH6-207ENST00000456246 HES6Q96HZ4 224 aa17.58■□□□□ 0.4
MSH6-207ENST00000456246 BBC3Q96PG8 261 aaPredicted RBP17.58■□□□□ 0.4
MSH6-207ENST00000456246 ASPSCR1Q9BZE9 553 aa17.58■□□□□ 0.4
MSH6-207ENST00000456246 ARNT2Q9HBZ2 717 aa17.58■□□□□ 0.4
MSH6-207ENST00000456246 TRIM10Q9UDY6 481 aa17.58■□□□□ 0.4
MSH6-207ENST00000456246 DNAJC16Q9Y2G8 782 aa17.58■□□□□ 0.4
MSH6-207ENST00000456246 ZNF106Q9H2Y7 1883 aaKnown RBP17.58■□□□□ 0.4
MSH6-207ENST00000456246 STMND1H3BQB6 276 aa17.57■□□□□ 0.4
MSH6-207ENST00000456246 DDX3YO15523 660 aaKnown RBP17.57■□□□□ 0.4
MSH6-207ENST00000456246 KRT86O43790 486 aa17.57■□□□□ 0.4
MSH6-207ENST00000456246 FGF3P11487 239 aaPredicted RBP17.57■□□□□ 0.4
MSH6-207ENST00000456246 CCL4P13236 92 aa17.57■□□□□ 0.4
MSH6-207ENST00000456246 HADHAP40939 763 aa17.57■□□□□ 0.4
MSH6-207ENST00000456246 PARP6Q2NL67 630 aa17.57■□□□□ 0.4
MSH6-207ENST00000456246 GPRC6AQ5T6X5 926 aa17.57■□□□□ 0.4
MSH6-207ENST00000456246 TMEM26Q6ZUK4 368 aa17.57■□□□□ 0.4
MSH6-207ENST00000456246 C11orf96Q7Z7L8 435 aa17.57■□□□□ 0.4
MSH6-207ENST00000456246 ZNF398Q8TD17 642 aa17.57■□□□□ 0.4
MSH6-207ENST00000456246 NCSTNQ92542 709 aa17.57■□□□□ 0.4
MSH6-207ENST00000456246 TEFMQ96QE5 360 aaKnown RBP17.57■□□□□ 0.4
MSH6-207ENST00000456246 FAM118BQ9BPY3 351 aa17.57■□□□□ 0.4
MSH6-207ENST00000456246 TBL1YQ9BQ87 522 aa17.57■□□□□ 0.4
MSH6-207ENST00000456246 FRMD8P1Q9BZ68 369 aaPredicted RBP17.57■□□□□ 0.4
MSH6-207ENST00000456246 FOXJ2Q9P0K8 574 aa17.57■□□□□ 0.4
MSH6-207ENST00000456246 ARL5AQ9Y689 179 aa17.57■□□□□ 0.4
MSH6-207ENST00000456246 MN1Q10571 1320 aaPredicted RBP17.56■□□□□ 0.4
MSH6-207ENST00000456246 GAPDHSO14556 408 aaPredicted RBP17.56■□□□□ 0.4
MSH6-207ENST00000456246 BUD23O43709 281 aaKnown RBP17.56■□□□□ 0.4
MSH6-207ENST00000456246 UGT1A9O60656 530 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 SRP72O76094 671 aaKnown RBP17.56■□□□□ 0.4
MSH6-207ENST00000456246 ANKRD34CP0C6C1 535 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 UGT1A6P19224 532 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 MSH3P20585 1137 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 UGT1A1P22309 533 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 UGT1A4P22310 534 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 AKT1P31749 480 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 UGT1A3P35503 534 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 SLC19A1P41440 591 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 MAPK9P45984 424 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 ARHGAP22Q7Z5H3 698 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 DTX1Q86Y01 620 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 RASGEF1AQ8N9B8 481 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 OR4K2Q8NGD2 314 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 SLC35B2Q8TB61 432 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 HEXDCQ8WVB3 486 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 SLC39A7Q92504 469 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 ULK4Q96C45 1275 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 CXorf40BQ96DE9 158 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 LRRC40Q9H9A6 602 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 UGT1A7Q9HAW7 530 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 UGT1A10Q9HAW8 530 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 UGT1A8Q9HAW9 530 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 TMEM9Q9P0T7 183 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 SCHIP1Q9P0W5 487 aaPredicted RBP17.56■□□□□ 0.4
MSH6-207ENST00000456246 ZNF624Q9P2J8 865 aaPredicted RBP17.56■□□□□ 0.4
MSH6-207ENST00000456246 PACSIN2Q9UNF0 486 aaPredicted RBP17.56■□□□□ 0.4
MSH6-207ENST00000456246 CAPN6Q9Y6Q1 641 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 MGAQ8IWI9 3026 aa17.56■□□□□ 0.4
MSH6-207ENST00000456246 FASNP49327 2511 aaKnown RBP17.56■□□□□ 0.4
MSH6-207ENST00000456246 AGRPO00253 132 aa17.55■□□□□ 0.4
MSH6-207ENST00000456246 TOX3O15405 576 aaPredicted RBP17.55■□□□□ 0.4
MSH6-207ENST00000456246 PSMD3O43242 534 aa17.55■□□□□ 0.4
MSH6-207ENST00000456246 RALBP11234 206 aa17.55■□□□□ 0.4
MSH6-207ENST00000456246 BRAFP15056 766 aa17.55■□□□□ 0.4
MSH6-207ENST00000456246 MPSTP25325 297 aa17.55■□□□□ 0.4
MSH6-207ENST00000456246 ATP1A2P50993 1020 aa17.55■□□□□ 0.4
MSH6-207ENST00000456246 SEPT7Q16181 437 aaKnown RBP17.55■□□□□ 0.4
MSH6-207ENST00000456246 MANEAQ5SRI9 462 aa17.55■□□□□ 0.4
MSH6-207ENST00000456246 DCAF12Q5T6F0 453 aa17.55■□□□□ 0.4
MSH6-207ENST00000456246 SEL1L2Q5TEA6 688 aa17.55■□□□□ 0.4
MSH6-207ENST00000456246 FAM129CQ86XR2 697 aa17.55■□□□□ 0.4
MSH6-207ENST00000456246 FAM71DQ8N9W8 422 aa17.55■□□□□ 0.4
MSH6-207ENST00000456246 ART4Q93070 314 aa17.55■□□□□ 0.4
MSH6-207ENST00000456246 APOL2Q9BQE5 337 aa17.55■□□□□ 0.4
MSH6-207ENST00000456246 ZPBPQ9BS86 351 aa17.55■□□□□ 0.4
MSH6-207ENST00000456246 TBC1D10AQ9BXI6 508 aa17.55■□□□□ 0.4
MSH6-207ENST00000456246 ASB8Q9H765 288 aa17.55■□□□□ 0.4
MSH6-207ENST00000456246 SLC39A1Q9NY26 324 aa17.55■□□□□ 0.4
MSH6-207ENST00000456246 EFCAB7A8K855 629 aa17.54■□□□□ 0.4
MSH6-207ENST00000456246 AGAP14A8MT82 685 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms